Return to main results Retrieve Phyre Job Id

Job DescriptionP27296
Confidence98.97%DateThu Jan 5 11:43:42 GMT 2012
Rank66Aligned Residues141
% Identity23%Templated1oywa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  AAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQ
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Template Sequence  SGAKQVLQETFGYQQFRPGQEEIIDTVL. . . . . . SGRDCLVVXPTGGGKSLCYQIPAL. . . . LLNGLTVVVSPLISLXKD
Template Known Secondary structure  TT

SS

TT......TT


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S
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   11........20.........30........ .40.........50.........60.. .......70.........80
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  IYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGL
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Template Sequence  QVDQ. . . . LQANGVAAAC. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ....TT

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   81... .....90....
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  RDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLDEGH
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . LNSTQTREQQLEVXTGCRTGQIRLLYIAPERLXLDNFLEHLAHW. NPVLLAVDEAH
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TTS
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TSTTTTS.
SSGG
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   95....100.........110.........120.........130........ .140.........
 
   252.
Predicted Secondary structure 
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Query Sequence  HL
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Template Sequence  CI
Template Known Secondary structure  GG
Template Predicted Secondary structure 
Template SS confidence 

   150.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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