Return to main results Retrieve Phyre Job Id

Job DescriptionP27296
Confidence96.94%DateThu Jan 5 11:43:42 GMT 2012
Rank135Aligned Residues115
% Identity11%Templated1gm5a4
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.24

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   507..510.........520.........530.........540.........550.........560.........570.........580......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  VEPSIDNEEQHIAEMAAFFRKQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERS
Query Conservation                              
  



 

  
      
      
                        
Alig confidence 
























..




















































Template Conservation   
 
 
    
   
   
   
  ..  




   
     
   
   
  
   

      
      
  
   
Template Sequence  EVQTMLVPMDRVNEVYEFVRQEVMR. . GGQAFIVYPLIKSAVEMYEYLSKEVFKLGLMHGRLSQEEKDRVMLEFAEGRYD
Template Known Secondary structure 





SSTTTT..S

B

B




SGGGS


B



SSS

S
STTTSSS
Template Predicted Secondary structure 



..



















Template SS confidence 















































































   553......560.........570....... ..580.........590.........600.........610.........620.........630
 
   587..590.........600.........610.........620.....
Predicted Secondary structure 




















Query SS confidence 






































Query Sequence  VLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVIT
Query Conservation 

  
    



      
 


 


 
   
     
Alig confidence 














..





















Template Conservation 


 
 
   



 .. 
  

             
 
Template Sequence  ILVSTTVIEVGIDVP. . RANVMVIENPERFGLAQLHQLR
Template Known Secondary structure  B


SS


S
S

T..T

B
S
SSS
TT
Template Predicted Secondary structure 



..









Template SS confidence 






































   642.......650...... ...660.........670........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions