 |
Job Description | P27296 | Confidence | 63.07% | Date | Thu Jan 5 11:43:42 GMT 2012 |
Rank | 481 | Aligned Residues | 49 |
% Identity | 14% | Template | d1d5va_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Forkhead DNA-binding domain
|
Resolution | UNK |
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | I | A | A | W | Y | K | A | L | Q | E | Q | I | P | D | F | I | P | R | A | P | Q | R | Q | M | I | A | D | V | A | K | T | L | A | G | E | E | G | R | H | L | A | I | E | A | P | T | G | V | G | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |
|   |   |   |
|
|
|   | . | . |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |
|   |   |   |   |   |
|
|
Template Sequence |   |
T | L | N | G | I | Y | Q | F | I | M | D | R | F | P | F | Y | . |
. |
R | E | N | K | Q | G | W | Q | N | S | I | R | H | N | L | S | L | N | E | C | F | V | K | V | P | R | D | D | K | K | P | G | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
| T |  |  | . | . |  |  |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |
|
|
|
| T | T | S |
| S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|