Return to main results Retrieve Phyre Job Id

Job DescriptionP27296
Confidence96.14%DateThu Jan 5 11:43:42 GMT 2012
Rank146Aligned Residues67
% Identity16%Templatec3ezkB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dna packaging protein gp17; PDBTitle: bacteriophage t4 gp17 motor assembly based on crystal2 structures and cryo-em reconstructions
Resolution34.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60. ........70.........80.........90.....
Predicted Secondary structure 

















.





Query SS confidence 







































.

































Query Sequence  IPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKT. LSYLIPGIAIAREEQKTLVVSTANVALQDQIYSK
Query Conservation   
   

  
      
  

        










.

 
  

        

 
 
 
  

 

  
Alig confidence 

.














......















.

































Template Conservation    .
 
   
   
    ......  
  


 


 



  
   

         
 


 
   
  
   
Template Sequence  IK. VQLRDYQRDMLKIMS. . . . . . SKRMTVCNLSRQLGKTTVVAIFLAHFVCFNKDKAVGILAHKGSMSAEVLDR
Template Known Secondary structure  .



......
S
TTS
TSSS
SS
Template Predicted Secondary structure  .

......













Template SS confidence 










































































   135. ...140.........150. ........160.........170.........180.........190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions