Job Description P27296 Confidence 90.63% Date Thu Jan 5 11:43:42 GMT 2012 Rank 270 Aligned Residues 51 % Identity 29% Template c3cf1C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx Resolution 4.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	K	A	Q	I	A	A	W	Y	K	A	L	Q	E	Q	I	P	D	F	I	P	R	A	P	Q	R	Q	M	I	A	D	V	A	K	T	L	A	G	E	E	G	R	H	L	A	I	E	A	P	T	G	V	G	K	T	L	S	Y	L	I	P	G	I	A	I
Query Conservation
Alig confidence													.	.	.	.	.								.	.	.	.	.	.	.	.	.																											.	.
Template Conservation													.	.	.	.	.								.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		R	K	Q	L	A	Q	I	K	E	M	V	.	.	.	.	.	E	L	P	L	R	H	P	.	.	.	.	.	.	.	.	.	A	L	F	K	A	I	G	V	K	P	P	R	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	.	.	I	A	R	A	V	A	N
Template Known Secondary structure													.	.	.	.	.	T	T	T	T	T		T	.	.	.	.	.	.	.	.	.	T	T	T	T	T													S		T	T	S					.	.
Template Predicted Secondary structure													.	.	.	.	.								.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.	.										.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions