Job Description P27296 Confidence 93.26% Date Thu Jan 5 11:43:42 GMT 2012 Rank 214 Aligned Residues 51 % Identity 25% Template c2x8aA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nuclear valosin-containing protein-like; PDBTitle: human nuclear valosin containing protein like (nvl), c-2 terminal aaa-atpase domain Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	K	A	Q	I	A	A	W	Y	K	A	L	Q	E	Q	I	P	D	F	I	P	R	A	P	Q	R	Q	M	I	A	D	V	A	K	T	L	A	G	E	E	G	R	H	L	A	I	E	A	P	T	G	V	G	K	T	L	S	Y	L	I	P	G	I	A	I
Query Conservation
Alig confidence														.	.	.	.	.	.	.									.	.	.	.	.	.	.																									.	.
Template Conservation														.	.	.	.	.	.	.									.	.	.	.	.	.	.																									.	.
Template Sequence		E	D	I	R	E	E	L	T	M	A	I	L	.	.	.	.	.	.	.	A	P	V	R	N	P	D	Q	.	.	.	.	.	.	.	F	K	A	L	G	L	V	T	P	A	G	V	L	L	A	G	P	P	G	C	G	K	T	L	.	.	L	A	K	A	V	A	N
Template Known Secondary structure													T	.	.	.	.	.	.	.					S				.	.	.	.	.	.	.				T	T					S						S	S	T	T	S					.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.									.	.	.	.	.	.	.																									.	.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.								.	600	.	.	.	.	.	.								.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630			.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions