Job Description P27296 Confidence 95.64% Date Thu Jan 5 11:43:42 GMT 2012 Rank 152 Aligned Residues 84 % Identity 26% Template c2ipcB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:preprotein translocase seca subunit; PDBTitle: crystal structure of the translocation atpase seca from thermus2 thermophilus reveals a parallel, head-to-head dimer Resolution 2.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	I	P	R	A	P	Q	R	Q	M	I	A	D	V	A	K	T	L	A	G	E	E	G	R	H	L	A	I	E	A	P	T	G	V	G	K	T	L	S	Y	L	I	P	G	I	A	I	A	R	E	E	Q	K	T	L	V	V	S	T	A	N	V	A	L	Q	D	Q	I	Y	S	K	D	L	P	L	L	K	K	I
Query Conservation
Alig confidence										.	.	.	.	.	.														.	.																							.											.	.	.	.
Template Conservation										.	.	.	.	.	.														.	.																							.											.	.	.	.
Template Sequence		G	M	R	H	F	D	V	Q	.	.	.	.	.	.	L	I	G	G	A	V	L	H	E	G	K	I	A	.	.	E	M	K	T	G	E	G	K	T	L	V	A	T	L	A	V	A	L	N	A	L	T	.	G	K	G	V	H	V	V	T	V	N	.	.	.	.	D	Y	L	A	R	R	D	A	E	W	M	G	P	V
Template Known Secondary structure										.	.	.	.	.	.									T	T	S			.	.				S	T																T	T	.		S							S	S	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.														.	.																							.											.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.
		104	.			.	.	.	.	110	.	.	.	.								.	.	.	.	.	120
Predicted Secondary structure				.	.										.	.	.	.	.	.	.
Query SS confidence				.	.										.	.	.	.	.	.	.
Query Sequence		I	P	.	.	D	L	K	F	T	A	A	F	G	.	.	.	.	.	.	.	R	G	R	Y	V	C
Query Conservation				.	.										.	.	.	.	.	.	.
Alig confidence				.	.										.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	R	G	L	G	L	S	V	G	V	I	Q	H	A	S	T	P	A	E	R	R	K	A	Y	L	A
Template Known Secondary structure				T	T	T								T	T											T	S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions