Job Description P22731 Confidence 96.55% Date Thu Jan 5 11:39:07 GMT 2012 Rank 184 Aligned Residues 156 % Identity 17% Template c3kx2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		I	N	Q	G	E	I	V	T	L	I	G	A	N	G	A	G	K	T	T	L	L	G	T	L	C	.	.	.	G	D	P	R	A	T	S	G	R	I	V	F	D	D	K	D	I	T	D	W	Q	T	A	K	I	M	R	E	A	V	A	I	V	P	E	G	R	R	V	F	S	R	M	T	V	E	E	N	L	A	M	G
Query Conservation																											.	.	.
Alig confidence																											.	.	.													.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		Y	Q	N	N	Q	I	M	V	F	V	G	E	T	G	S	G	K	T	T	Q	I	P	Q	F	V	L	F	D	E	M	P	H	L	E	N	T	Q	V	A	C	.	.	.	.	.	.	T	Q	P	R	R	V	A	A	M	S	V	A	Q	R	V	A	E	E	M	D	V	K	L	G	E	E	V	G	Y	S	I	R	F	E
Template Known Secondary structure						S								T	T	S	S															G	G	G	G	T						.	.	.	.	.	.			S																T	T			B	T	T	T						T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		G	F	F	A	E	R	D	Q	F	Q	E	R	I	K	W	V	Y	E	L	F	P	R	L	H	E	R	R	I	Q	R	A	G	T	M	S	G	G	E	Q	Q	M	L	A	I	G	R	A	L	M	S	N	P	R	L	L	L	L	D	E	P	.	S	L	G	L	A	P	I	I	I	Q	Q	I	F	D	T	I	E	Q	L
Query Conservation																																																														.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	T	S	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	L	K	Y	M	T	D	G	M	L	L	R	E	A	M	E	D	H	D	L	S	R	Y	S	C	I	I	L	D	E	A	H	E	R	T	L	A	T	D	I	L	M	G	L	L	K	Q	V	V	K	R
Template Known Secondary structure						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T		T	T									G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.																							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		R	E	Q	G	M	T	I	F	L	V	.	E	Q	N	A	N	Q	A	L	K	L	A	D	R	G	Y	V	L	E
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		R	P	D	L	K	I	I	I	M	S	A	T	L	D	A	E	K	F	Q	R	Y	F	N	D	A	P	L	L	A
Template Known Secondary structure			T	T								S	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions