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Job DescriptionP22731
Confidence100.00%DateThu Jan 5 11:39:07 GMT 2012
Rank39Aligned Residues226
% Identity25%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LSFDKVSAHY. . GKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDDKDITDWQTAKIMREAVA
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Template Sequence  MTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLL. NTEGEIQIDGVSWDSITLEQ. WRKAFG
Template Known Secondary structure  SSTTS

TT

TTSSTT
S.TTSSSS
.GGG
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Query Sequence  IVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFP. . . . . RLHERRIQRAGTMSGGEQQMLAIGRALMSNPRL
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Template Sequence  VIPQKVFIFSG. TFRKNLDPNAAHSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI
Template Known Secondary structure  S





SS.B
TTS
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TTTT
TTTGGGSTTGGG
B

TTTTTS
TT

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Query Sequence  LLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEA. . VRSAYLG
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Template Sequence  LLLDEPSAHLDPVTYQIIRRTLKQA. . FADCTVILCEARIEAMLECDQFLVIEENKVRQYDSILELYHYPADRFVAGFIG
Template Known Secondary structure  SS
T..TTTS
SSGGGSTT
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   1367..1370.........1380.........1390. ........1400.........1410.........1420.........1430.........1440....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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