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Job DescriptionP22731
Confidence94.89%DateThu Jan 5 11:39:07 GMT 2012
Rank389Aligned Residues131
% Identity21%Templatec2j289_
PDB info PDB header:ribosomeChain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs
Resolution8.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60 .........70.........80.........90.........100
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Query Sequence  HEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSG. RIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEEN
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Template Sequence  QTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   91........100.........110.........120.........130.........140.
 
   101........110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  LAMGGFFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTI
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Template Sequence  . . . . . . . . . . PAAIKQLETLAEQV. GVDFFPSDVGQKPVDIVNAALKEAKL. . KFYDVLLVDTAGRLHVDEAMMDEIKQV
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   142.......150..... ....160.........170.........180. ........190.........200........
 
   181........190....
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Query Sequence  EQLREQGMTIFLVE
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Template Sequence  HASINPVETLFVVD
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   209210.........220..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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