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Job DescriptionP22731
Confidence100.00%DateThu Jan 5 11:39:07 GMT 2012
Rank27Aligned Residues229
% Identity30%Templatec2hydB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EKVMLSFDKVSAHYGK. . IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDDKDITDWQTAKIMR
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Template Sequence  KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGS. LR
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Query Sequence  EAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKW. . . . . . VYELFPRLHERRIQRAGTMSGGEQQMLAIGRALM
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Template Sequence  NQIGLVQQDNILFSD. TVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFL
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SS.BGGG
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TSTTGGG
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GGGTTS
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Query Sequence  SNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEA. VRS
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Template Sequence  NNPPILILDEATSALDLESESIIQEALDVLS. KDRTTLIVAHRLSTIT. HADKIVVIENGHIVETGTHRELIAKQGAYEH
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   494.....500.........510.........520.... .....530.........540 .........550.........560.........570.
 
   233.
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Query Sequence  AY
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Template Sequence  LY
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   572.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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