Return to main results Retrieve Phyre Job Id

Job DescriptionP39208
Confidence99.74%DateThu Jan 5 11:58:30 GMT 2012
Rank19Aligned Residues162
% Identity14%Templated1q3ta_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.......
Predicted Secondary structure 


















.......................
Query SS confidence 
























































. . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDR. . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
 
  
 
 
  







  

  

   

 
                      .......................
Alig confidence 
























































.......................
Template Conservation 

  

 
 
  







  

  

   

     
                                         
Template Sequence  MKTIQIAIDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRAATYMALKNQLGVEEVEALLALLDQHPISFGRSETGDQLVF
Template Known Secondary structure 




SS
SS

TT

TT
S

TTT
Template Predicted Secondary structure 

















Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   58.60.........70.........80.........90.........100.........110...
Predicted Secondary structure  ........................

















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . .























































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . LPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETIL
Query Conservation  ........................                     

                      
          
Alig confidence  ........................


































......














Template Conservation                                               
             ...... 

 
 
    
   
Template Sequence  VGDVDITHPIRENEVTNHVSAIAAIPEVREKLVSLQQEIAQQGGIVMDGRDIGTVVLPQ. . . . . . AELKIFLVASVDERA
Template Known Secondary structure  TTSSSS
STSTTS

SS
SSSSGGG......
S

Template Predicted Secondary structure 














......



Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.. .......160.......
 
   114.....120.........130........ .140.........150... ......160........
Predicted Secondary structure 




...........








.
Query SS confidence 
























. . . . . . . . . . .














.














Query Sequence  ARMQRRAGHFMPVALLKSQFEALER. . . . . . . . . . . PQADEQDIVRIDINH. DIANVTEQCRQAVLA
Query Conservation   
   
                   ...........          

   .  
     
   
  
Alig confidence 
























...........














.














Template Conservation   
   
          
                           





    


   
   
  
Template Sequence  ERRYKENIAKGIETDLETLKKEIAARDYKDSHRETSPLKQAEDAVYLDTTGLNIQEVVEKIKAEAEK
Template Known Secondary structure  TT



TT
SSS

S

TT

SS

Template Predicted Secondary structure 

















Template SS confidence 


































































   168.170.........180.........190.........200.........210.........220.........230....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions