Return to main results Retrieve Phyre Job Id

Job DescriptionP39208
Confidence99.58%DateThu Jan 5 11:58:30 GMT 2012
Rank74Aligned Residues159
% Identity20%Templated1jjva_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
Predicted Secondary structure 

















....................
Query SS confidence 



























































. . . . . . . . . . . . . . . . . . . .
Query Sequence  AGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWL. . . . . . . . . . . . . . . . . . . .
Query Conservation   
  
 
 
  







  

  

   

 
                          ....................
Alig confidence 























.


































....................
Template Conservation 
  

 
 
  







  
  . 
   
  
                              
               
Template Sequence  MTYIVGLTGGIGSGKTTIANLFTD. LGVPLVDADVVAREVVAKDSPLLSKIVEHFGAQILNRAALRERVFNHDEDKLWLN
Template Known Secondary structure 


STTS
T.TT

TT
SS

TT


T
Template Predicted Secondary structure 







.















Template SS confidence 















































































   1........10.........20.... .....30.........40.........50.........60.........70.........
 
   62.......70.........80.........90.........100.........110.........120.........130......
Predicted Secondary structure  .....






















Query SS confidence  . . . . .










































































Query Sequence  . . . . . ERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEAL
Query Conservation  .....                 

                      
           
   
                 
Alig confidence  .....

































....



















......










Template Conservation        
                                ....
  
 
         
   
......           
Template Sequence  NLLHPAIRERMKQKLAEQTAPYTLFVVPLLIENKLTALC. . . . DRILVVDVSPQTQLARSANF. . . . . . EQIQRIMNSQV
Template Known Secondary structure  T

SS
TTTTTTT
GGG
....S



......S
Template Predicted Secondary structure 










....





......

Template SS confidence 















































































   86...90.........100.........110.........120.... .....130.........140.... .....150.....
 
   137..140.........150.........160.........170.
Predicted Secondary structure 









Query SS confidence 


































Query Sequence  ERPQADEQDIVRIDINHDIANVTEQCRQAVLAIRQ
Query Conservation              

     
     
   
     
Alig confidence 


































Template Conservation          

 



   


    
   
  
  
Template Sequence  SQQERLKWADDVINNDAELAQNLPHLQQKVLELHQ
Template Known Secondary structure 

S

S
Template Predicted Secondary structure 






Template SS confidence 


































   161........170.........180.........190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions