Return to main results Retrieve Phyre Job Id

Job DescriptionP39208
Confidence98.14%DateThu Jan 5 11:58:30 GMT 2012
Rank176Aligned Residues155
% Identity17%Templated1ji0a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20....... ..30.........40.........50.........60.........70.......
Predicted Secondary structure 









....











Query SS confidence 

























. . . .

















































Query Sequence  AGESFILMGVSGSGKTLIGSKVAALL. . . . SAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNET
Query Conservation   
  
 
 
  







  

  
....
   

 
                                          
Alig confidence 

























....













































....
Template Conservation   

   
 
 








  
 
      
 
   
  
            
        
    
  
 
    ....
Template Sequence  RGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRXGIALVPEGRRIFPELTVYENLXXGA. . . .
Template Known Secondary structure  TT

STTSSTTSS

STT
TT

TT
SS



TTSBGGG....
Template Predicted Secondary structure 











































....
Template SS confidence 















































































   30.........40.........50.........60.........70.........80.........90.........100.....
 
   78.80.........90.........100.........110.........120.........130.........140.........150 .....
Predicted Secondary structure 
























..



Query SS confidence 








































































. .




Query Sequence  GFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQADEQDIVRID. . INHDI
Query Conservation   

                      
           
   
                             

..     
Alig confidence  ...............

























































..




Template Conservation  ...............                                 

 
   

 

 

   
 






   

Template Sequence  . . . . . . . . . . . . . . . YNRKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQXLAIGRALXSRPKLLXXDEPSLGLA
Template Known Secondary structure  ...............TT


SS
TTTTSBSSSS
TT

S
TTTT

Template Predicted Secondary structure  ...............






















Template SS confidence 















































































   106...110.........120.........130.........140.........150.........160.........170
 
   156...160.........170.....
Predicted Secondary structure 



Query SS confidence 



















Query Sequence  ANVTEQCRQAVLAIRQNRIC
Query Conservation 
     
   
      
  
Alig confidence 



















Template Conservation        
   
      
 
Template Sequence  PILVSEVFEVIQKINQEGTT
Template Known Secondary structure  TT

Template Predicted Secondary structure 


Template SS confidence 



















   171........180.........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions