Job Description P39208 Confidence 98.29% Date Thu Jan 5 11:58:30 GMT 2012 Rank 151 Aligned Residues 82 % Identity 18% Template c3fozB_ PDB info PDB header:transferase/rna Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate transferase; PDBTitle: structure of e. coli isopentenyl-trna transferase in complex with e.2 coli trna(phe) Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																		.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	F	I	L	M	G	V	S	G	S	G	K	T	L	I	G	S	K	V	A	A	L	L	S	A	K	F	I	D	G	D	D	L	H	P	A	K	N	I	D	K	M	S	Q	G	I	P	L	S	D	E	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	W	L	E	R	L	N	D
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	I	F	L	M	G	P	T	A	S	G	K	T	A	L	A	I	E	L	R	K	I	L	P	V	E	L	I	S	V	D	S	A	L	I	Y	K	G	M	D	I	G	T	A	K	P	N	A	E	E	L	L	A	A	P	H	R	L	L	D	I	R	D	P	S	Q	A	Y	S	A	A	D	F	R	R	D	A	L	A
Template Known Secondary structure										S	S	S										T	T	T	S									S	S	T	T	B	T	T			T	T	T	T				T	T					S				S	S	S		B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	Y	S	L	Y	K	K	N	E	T	G	F	I	V	C	S	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	A	D	I	T	A	A	G	R	I	P	L	L	V	G	G	T	M
Template Known Secondary structure									T	T								S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions