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Job DescriptionP39208
Confidence98.21%DateThu Jan 5 11:58:30 GMT 2012
Rank168Aligned Residues163
% Identity12%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIV
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Template Sequence  DGMVVGIVGPNGTGKTTAVKILAGQLI. . . . . . . . . . . PNLCEDNDSWDNVIRAFRGNELQNYFERLKNGEIRPVVKPQY
Template Known Secondary structure  TTS

TTSSTTSS
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TTTT


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S
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   102.......110.........120........ .130.........140.........150.........160.........170
 
   82.......90.........100.........110.........120.........130.........140.........150 .........
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Query Sequence  CSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQADEQDIVRID. . INHDIANVT
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Template Sequence  VDLLPKAVKGKVRELLKKVDEVGKFEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQR
Template Known Secondary structure  GGGGGGT

SBT

SS
TT
TTGGGSBGGG

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TTTT

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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   160.........170.....
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Query Sequence  EQCRQAVLAIRQNRIC
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Template Sequence  LKVARVIRRLANEGKA
Template Known Secondary structure  TT
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   251........260......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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