Job Description P39208 Confidence 99.58% Date Thu Jan 5 11:58:30 GMT 2012 Rank 73 Aligned Residues 160 % Identity 16% Template c2z0hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase in complex with dtdp2 and adp from thermotoga maritima Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		S	F	I	L	M	G	V	S	G	S	G	K	T	L	I	G	S	K	V	A	A	L	L	S	.	.	.	.	.	A	K	F	I	D	G	D	D	L	H	P	A	K	N	I	D	K	M	S	Q	G	I	P	L	S	D	E	D	R	L	P	W	L	E	R	L	N	D	A	S	Y	S	L	Y	K	K	N	E	T	G	F
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.
Template Conservation
Template Sequence		F	I	T	F	E	G	I	D	G	S	G	K	S	T	Q	I	Q	L	L	A	Q	Y	L	E	K	R	G	K	V	I	L	K	R	E	P	G	G	T	E	T	G	E	K	I	R	K	I	L	L	E	E	E	V	T	P	K	A	E	L	F	L	F	L	A	S	R	N	L	L	V	T	E	I	K	Q	Y	Y	A	V	L
Template Known Secondary structure								S	T	T	S	S																							S	S		S	S													S																							T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.																	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	C	S	S	L	K	K	Q	Y	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	R	K	G	S	P	H	V	H	F	L	W	L	D	G	D	Y	E	T	I	L	A	R	M	Q	R	R	A	G	H	F	M	P	V	A	L	L	K	S	Q	F	E	A	L	E	R	P	Q	A	D	E
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Template Conservation																																																																																.	.
Template Sequence		L	D	R	Y	T	D	S	S	V	A	Y	Q	G	F	G	R	N	L	G	K	E	I	V	E	E	L	N	D	F	A	T	D	G	L	I	P	D	L	T	F	Y	I	D	V	D	V	E	T	A	L	K	R	K	N	R	F	E	K	R	E	F	L	E	R	V	R	E	G	Y	L	V	L	A	R	E	H	P	E	.	.
Template Known Secondary structure				S									T	T	T	T	T		S														T	T				S																																								T	T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	I	V	R	I	D	I	N	H	D	I	A	N	V	T	E	Q	C	R	Q	A	V	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	R	I	V	V	L	D	G	K	R	S	I	E	E	I	H	R	D	V	V	R	E	V	K
Template Known Secondary structure		.	T						T	T	S													T	T
Template Predicted Secondary structure		.
Template SS confidence
			168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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