Job Description P39208 Confidence 99.63% Date Thu Jan 5 11:58:30 GMT 2012 Rank 63 Aligned Residues 162 % Identity 16% Template c2rh5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:adenylate kinase; PDBTitle: structure of apo adenylate kinase from aquifex aeolicus Resolution 2.48 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		S	F	I	L	M	G	V	S	G	S	G	K	T	L	I	G	S	K	V	A	A	L	L	S	A	K	F	I	D	G	D	D	L	H	P	A	K	N	I	D	K	M	S	Q	G	I	P	L	S	D	E	D	R	L	P	W	L	E	.	.	.	R	L	N	D	A	S	Y	S	L	Y	K	K	N	E	T	G	F	I	V
Query Conservation																																																												.	.	.
Alig confidence																																																												.	.	.
Template Conservation
Template Sequence		I	L	V	F	L	G	P	P	G	A	G	K	G	T	Q	A	K	R	L	A	K	E	K	G	F	V	H	I	S	T	G	D	I	L	R	E	A	V	Q	K	G	T	P	L	G	K	K	A	K	E	Y	M	E	R	G	E	L	V	P	D	D	L	I	I	A	L	I	E	E	V	F	P	K	H	G	N	V	I	F	D
Template Known Secondary structure									T	T	S																															T													T	T															T			S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																																.	.	.	.
Predicted Secondary structure							.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	S	S	L	K	.	.	.	.	.	K	Q	Y	R	D	I	L	R	K	G	S	P	H	V	H	F	L	W	L	D	G	D	Y	E	T	I	L	A	R	M	Q	R	R	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	F	M	P
Query Conservation							.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	P	R	T	V	K	Q	A	E	A	L	D	E	M	L	E	K	K	G	L	K	V	D	H	V	L	L	F	E	V	P	D	E	V	V	I	E	R	L	S	G	R	R	I	N	P	E	T	G	E	V	Y	H	V	K	Y	N	P	P	P	P	G	V	K	V	I	Q	R	E	D	D	K	P	E	V	I	K	K	R
Template Known Secondary structure		S				S													T	T	T																						T					T	T	T						T	T	T	B				T	T				B			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	L	K	S	Q	F	E	A	L	E	R	P	Q	A	D	E	Q	D	I	V	R	I	D	I	N	H	D	I	A	N	V	T	E	Q	C	R	Q	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	V	Y	R	E	Q	T	A	P	L	I	E	Y	Y	K	K	K	G	I	L	R	I	I	D	A	S	K	P	V	E	E	V	Y	R	Q	V	L	E	V	I
Template Known Secondary structure																		T	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions