Return to main results Retrieve Phyre Job Id

Job DescriptionP39208
Confidence99.74%DateThu Jan 5 11:58:30 GMT 2012
Rank18Aligned Residues168
% Identity14%Templatec2bwjC_
PDB info PDB header:transferaseChain: C: PDB Molecule:adenylate kinase 5; PDBTitle: structure of adenylate kinase 5
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50....... ..60.........70....
Predicted Secondary structure 

















.......
Query SS confidence 























































. . . . . . .
















Query Sequence  AGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDR. . . . . . . LPWLERLNDASYSLYKK
Query Conservation   
  
 
 
  







  

  

   

 
                      .......                 
Alig confidence 























































.......
















Template Conservation 
 
 
 
 
  





 
  

  
    
                                          
      
Template Sequence  KCKIIFIIGGPGSGKGTQCEKLVEKYGFTHLSTGELLREELASESERSKLIRDIMERGDLVPSGIVLELLKEAMVASLGD
Template Known Secondary structure  TS

TTSS

TT
T



SSS
Template Predicted Secondary structure 


















Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   75....80.........90 .........100.........110.........120.... .....130.........140..
Predicted Secondary structure 







.













...........

Query SS confidence 















.

































. . . . . . . . . . .

















Query Sequence  NETGFIVCSSLKKQYR. DILRKGSPHVHFLWLDGDYETILARMQRRAGHFM. . . . . . . . . . . PVALLKSQFEALERPQAD
Query Conservation      

          .            
           
   
     ...........                  
Alig confidence 















.

































...........

















Template Conservation                               
 
         

  
                                  
Template Sequence  TRGFLIDGYPREVKQGEEFGRRIGDPQLVICMDCSADTMTNRLLQMSRSSLPVDDTTKTIAKRLEAYYRASIPVIAYYET
Template Known Secondary structure 
S
S

SST


S

T



S
T
Template Predicted Secondary structure 

























Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   143......150.........160.........
Predicted Secondary structure 







Query SS confidence 


























Query Sequence  EQDIVRIDINHDIANVTEQCRQAVLAI
Query Conservation        

     
     
   
   
Alig confidence 


























Template Conservation        

   
 


   
   
  
Template Sequence  KTQLHKINAEGTPEDVFLQLCTAIDSI
Template Known Secondary structure  TSTTS
Template Predicted Secondary structure 







Template SS confidence 


























   170.........180.........190......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions