Job Description P39208 Confidence 99.77% Date Thu Jan 5 11:58:30 GMT 2012 Rank 11 Aligned Residues 157 % Identity 15% Template c1zuiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:shikimate kinase; PDBTitle: structural basis for shikimate-binding specificity of helicobacter2 pylori shikimate kinase Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	F	I	L	M	G	V	S	G	S	G	K	T	L	I	G	S	K	V	A	A	L	L	S	A	K	F	I	D	G	D	D	L	H	P	A	K	N	I	D	K	M	S	Q	G	I	P	L	S	D	E	D	R	L	P	W	L	E	R	L	N	D	A	S	Y	S	L	Y	K	K	N	E	T	G	F	I	V	C	S
Query Conservation
Alig confidence																																																						.	.
Template Conservation																																																						.	.
Template Sequence		Q	H	L	V	L	I	G	F	M	G	S	G	K	S	S	L	A	Q	E	L	G	L	A	L	K	L	E	V	L	D	T	D	M	I	I	S	E	R	V	G	L	S	V	R	E	I	F	E	E	L	G	E	.	.	D	N	F	R	M	F	E	K	N	L	I	D	E	L	K	T	L	K	T	P	H	V	I	S	T	G
Template Known Secondary structure								S		T	T	S														T															T	S												.	.															T	T		S	S
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		S	L	K	K	Q	Y	R	D	I	L	R	K	G	S	P	H	V	H	F	L	W	L	D	G	D	Y	E	T	I	L	A	R	M	Q	R	R	A	G	H	F	M	P	V	A	L	L	K	.	S	Q	F	E	A	L	E	R	P	Q	A	D	E	Q	D	I	V	R	I	D	I	N	H	D	I	A	N	V	T	E	Q	C
Query Conservation																																																	.
Alig confidence			.	.	.	.																																											.
Template Conservation			.	.	.	.
Template Sequence		G	.	.	.	.	G	I	V	M	H	E	N	L	K	G	L	G	T	T	F	Y	L	K	M	D	F	E	T	L	I	K	R	L	N	Q	R	E	K	R	P	L	L	N	N	L	T	Q	A	K	E	L	F	E	K	R	Q	A	L	Y	E	K	N	A	S	F	I	I	D	A	R	G	G	L	N	N	S	L	K	Q	V
Template Known Secondary structure		T	.	.	.	.	T	G	G	G		G	G	G	T	T	S																								G	G	G	G	S																				S						S	S
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		163	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	F	I
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions