Return to main results Retrieve Phyre Job Id

Job DescriptionP39208
Confidence98.08%DateThu Jan 5 11:58:30 GMT 2012
Rank193Aligned Residues30
% Identity23%Templatec1xwiA_
PDB info PDB header:protein transportChain: A: PDB Molecule:skd1 protein; PDBTitle: crystal structure of vps4b
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30..
Predicted Secondary structure 










Query SS confidence 





























Query Sequence  GESFILMGVSGSGKTLIGSKVAALLSAKFI
Query Conservation 
  
 
 
  







  

  

   
Alig confidence 





























Template Conservation    



 







 

 


        
Template Sequence  WRGILLFGPPGTGKSYLAKAVATEANNSTF
Template Known Secondary structure 
SSSSSS
TTS
Template Predicted Secondary structure 










Template SS confidence 





























   167..170.........180.........190......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions