Job Description P0A7S3 Confidence 100.00% Date Thu Jan 5 11:06:07 GMT 2012 Rank 5 Aligned Residues 114 % Identity 28% Template c2xzmL_ PDB info PDB header:ribosome Chain: L: PDB Molecule:40s ribosomal protein s12; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.											.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																																											.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.																																											.
Query Sequence		M	A	T	V	N	Q	L	V	R	K	P	R	A	R	K	.	.	.	.	.	.	.	.	.	.	V	A	K	S	N	V	P	A	L	E	A	C	P	Q	K	R	G	V	C	T	R	V	Y	T	T	T	P	K	K	P	N	S	A	L	R	K	V	C	R	V	R	L	.	T	N	G	F	E	V	T	S	Y	I	G	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.																																											.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation
Template Sequence		I	R	A	G	R	K	L	A	R	H	R	K	D	Q	R	W	A	D	N	D	F	N	K	R	L	L	G	S	R	W	R	N	P	F	M	G	A	S	H	A	K	G	L	V	T	E	K	I	G	I	E	S	K	Q	P	N	S	A	V	R	K	C	V	R	V	L	L	R	K	N	S	K	K	I	A	A	F	V	P	M
Template Known Secondary structure		S	S													G	G	G									T	T		G	G	G	S	T	T	T	T		S																T	T													T	T	T										S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		70	.			.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure				.	.												.	.	.	.	.																		.	.
Query SS confidence				.	.												.	.	.	.	.																		.	.
Query Sequence		E	G	.	.	H	N	L	Q	E	H	S	V	I	L	I	.	.	.	.	.	R	G	G	R	V	K	D	L	P	G	V	R	Y	H	T	V	R	.	.	G	A	L	D	C	S	G	V	K	D	R	K	Q	A	R
Query Conservation				.	.												.	.	.	.	.																		.	.
Alig confidence				.	.												.	.	.	.	.																		.	.
Template Conservation
Template Sequence		D	G	C	L	N	F	L	A	E	N	D	E	V	L	V	A	G	L	G	R	Q	G	H	A	V	G	D	I	P	G	V	R	F	K	V	V	C	V	K	G	I	S	L	L	A	L	F	K	G	K	K	E	K	R
Template Known Secondary structure		S	S	G	G	G	T			T	T								S	S	S	S	S	S			T	T		S	S									S	S		B						S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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