|   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | Q | A | I | D | L | K | K | H | Y | P | V | K | K | G | M | F | A | P | E | R | L | V | K | A | L | D | G | V | S | F | N | L | E | R | G | K | T | L | A | V | V | G | E | S | G | C | G | K | S | T | L | G | R | L | L | T | M | I | E | M | P | T | G | G | E | L | Y | Y | Q | G | Q | D | L | L | K | H | D | P |
Query Conservation |   |
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|
|   |
|   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
| . |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
| . | . |
|
|
|
|   |   |   |   |   | . |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
F | L | K | V | . |
R | A | E | K | R | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | N | F | R | L | . |
. |
N | V | D | F | E | M | G | R | D | . |
Y | C | V | L | L | G | P | T | G | A | G | K | S | V | F | L | E | L | I | A | G | I | V | K | P | D | R | G | E | V | R | L | N | G | A | D | I | T | P | L | P | P |
Template Known Secondary structure |   |
|  |  |  | . |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | T | T |  |  |  | . | . |  |  |  |  |  |  |
| S | S | . |  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  | T | S | S |
|
| S |  |  |  |  |  |  | T | T |  |  |
| T | T | S |
| T |
Template Predicted Secondary structure |   |
 |  |  |  | . |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  | . | . |  |  |  |  |  |  |
|
|  | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | |
. | . | . | . | 10 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | |
|
. | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | Q | K | L | R | R | Q | K | I | Q | I | V | F | Q | N | P | Y | G | S | L | N | P | R | K | K | V | G | Q | I | L | E | E | P | L | L | I | N | T | S | L | S | K | E | Q | R | R | E | K | A | L | S | M | M | A | K | V | G | L | K | T | E | H | Y | D | R | Y | P | H | M | F | S | G | G | Q | R | Q | R | I | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|
|   |
Alig confidence |   |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   | . | . | . | . | . |
|   |   |
|   |   |   |   | . | . |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   | . |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |
Template Sequence |   |
E | R | R | G | . |
. |
. |
. |
. |
I | G | F | V | P | Q | D | Y | . |
. |
A | L | F | P | H | L | S | V | Y | R | N | I | A | Y | G | L | R | . |
. |
. |
N | V | E | R | V | E | R | D | R | R | V | R | E | M | A | E | K | L | G | I | A | . |
H | L | L | D | R | K | P | A | R | L | S | G | G | E | R | Q | R | V | A |
Template Known Secondary structure |   |
T | T | S |
| . | . | . | . | . |
| B |
|
|
| S | S |
| . | . |
|
|
| T | T | S |
|  |  |  |  |  |  | T | T |
| T | . | . | . | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| T | . | T | T | T | T |
|
| G | G | G | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  | . | . | . | . | . |  |  |  |  |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
68 | . | 70 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | |
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | R | G | L | M | L | D | P | D | V | V | I | A | D | E | P | V | S | A | L | D | V | S | V | R | A | Q | V | L | N | L | M | M | D | L | Q | Q | E | L | G | L | S | Y | V | F | I | S | H | D | L | S | V | V | E | H | I | A | D | E | V | M | V | M | Y | L | G | R | C | V | E | K | G | T | K | D | Q | I | F | N |
Query Conservation |   |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|   |
|
|
|   |
|   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |
|   |
|   |
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|
|   |   |
Template Sequence |   |
L | A | R | A | L | V | I | Q | P | R | L | L | L | L | D | E | P | L | S | A | V | D | L | K | T | K | G | V | L | M | E | E | L | R | F | V | Q | R | E | F | D | V | P | I | L | H | V | T | H | D | L | I | E | A | A | M | L | A | D | E | V | A | V | M | L | N | G | R | I | V | E | K | G | K | L | K | E | L | F | S |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|
| S | S | B |  |  |  | S | T | T | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  | S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
  |
  |   |
252 | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | P | R | H | P | Y | T | Q | A | L |
Query Conservation |   |
  |
|   |
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | K | N | G | E | V | A | E | F | L |
Template Known Secondary structure |   |
S |
|
| S | S |  |  |  |  | G |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
217 | . | . | 220 | . | . | . | . | . | . |
  |