Job Description P37313 Confidence 96.23% Date Thu Jan 5 11:55:10 GMT 2012 Rank 325 Aligned Residues 157 % Identity 17% Template c3kx2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp Resolution 2.20 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																					.						.	.
Query SS confidence																					.						.	.
Query Sequence		L	E	R	G	K	T	L	A	V	V	G	E	S	G	C	G	K	S	T	.	L	G	R	L	L	.	.	T	M	I	E	M	P	T	G	G	E	L	Y	Y	Q	G	Q	D	L	L	K	H	D	P	Q	A	Q	K	L	R	R	Q	K	I	Q	I	V	F	Q	N	P	Y	G	S	L	N	P	R	K	K	V	G	Q	I
Query Conservation																					.						.	.
Alig confidence																					.						.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.
Template Sequence		Y	Q	N	N	Q	I	M	V	F	V	G	E	T	G	S	G	K	T	T	Q	I	P	Q	F	V	L	F	D	E	M	P	H	L	E	N	T	Q	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	T	Q	.	.	.	.	.	.	.	P	R	R	V	A	A	M	S
Template Known Secondary structure						S								T	T	S	S															G	G	G	G	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																								.	.	.								.	.	150	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		L	E	E	P	L	L	I	N	T	S	L	S	K	E	Q	R	R	E	K	A	L	S	M	M	A	K	V	G	L	K	T	E	H	Y	D	R	Y	P	H	M	F	S	G	G	Q	R	Q	R	I	A	I	A	R	G	L	M	L	D	P	D	V	V	I	A	D	E	P	.	V	S	A	L	D	V	S	V	R	A	Q	V
Query Conservation																																																																					.
Alig confidence																																					.	.	.	.	.																												.
Template Conservation																																					.	.	.	.	.
Template Sequence		V	A	Q	R	V	A	E	E	M	D	V	K	L	G	E	E	V	G	Y	S	I	R	F	E	N	K	T	S	N	K	T	I	L	K	Y	.	.	.	.	.	M	T	D	G	M	L	L	R	E	A	M	E	D	H	D	L	S	R	Y	S	C	I	I	L	D	E	A	H	E	R	T	L	A	T	D	I	L	M	G	L
Template Known Secondary structure										T	T			B	T	T	T						T	T						T	T						.	.	.	.	.														T	T		T	T									G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	M	M	D	L	Q	Q	E	L	G	L	S	Y	V	F	I	S	H	D	L	S	V	V	E	H	I	A	D	E	V	M	V	M	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	Q	V	V	K	R	R	P	D	L	K	I	I	I	M	S	A	T	L	D	A	E	K	F	Q	R	Y	F	N	D	A	P	L	L	A
Template Known Secondary structure										T	T								S	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions