Return to main results Retrieve Phyre Job Id

Job DescriptionP37313
Confidence100.00%DateThu Jan 5 11:55:10 GMT 2012
Rank20Aligned Residues242
% Identity16%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  QQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIEMPTGGELYYQGQDLLK
Query Conservation    


 
  

  
    
       
 

  


 
  


 



 








  
 

  
  
 
   
  
  
Alig confidence 













........









































.














Template Conservation      
 
  


 
........       
  


 
  

   
 
 








  



 .   
 
   
     
Template Sequence  SGGQMTVKDLTAKY. . . . . . . . TEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLL. NTEGEIQIDGVSWDS
Template Known Secondary structure 
S

S........STTS

TT

TTSSTT
S.TTSSS
Template Predicted Secondary structure 


........


















.








Template SS confidence 















































































   1206...1210......... 1220.........1230.........1240.........1250.........1260. ........1270......
 
   8990.........100.........110.........120.........130.........140.........150.........160........
Predicted Secondary structure 






















































Query SS confidence 















































































Query Sequence  HDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQ
Query Conservation              
  
 

    
 
   
   
                      
             
  



  
Alig confidence 






...














.





















































Template Conservation         ...  
  
         .                                               




 
Template Sequence  ITLEQWR. . . KAFGVIPQKVFIFSG. TFRKNLDPNAAHSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQ
Template Known Secondary structure  S
G...GGS





SS.B
TTS
S
TTTT
TTTGGGSTTGGG
B

TTTTTS
Template Predicted Secondary structure 


...




.































Template SS confidence 















































































   1277..1280... ......1290........ .1300.........1310.........1320.........1330.........1340.........1350..
 
   169170.........180.........190.........200.........210.........220.........230.........240........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  RIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKDQ
Query Conservation 

 

 

   
 








 

      
   
  
    
 


 




       


 

  
 


 
   
Alig confidence 




































...







































Template Conservation 







   
 






 
 

      
   
 ...     
 
 



  
     
 
 

  
 
   
   
Template Sequence  LMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLK. . . QAFADCTVILCEARIEAMLECDQFLVIEENKVRQYDSILE
Template Known Secondary structure  TT

SS
...TTTTS
SSGGGSTT
S
SS
S
Template Predicted Secondary structure 











...














Template SS confidence 















































































   1353......1360.........1370.........1380......... 1390.........1400.........1410.........1420.........
 
   249250.........260......
Predicted Secondary structure 





Query SS confidence 

















Query Sequence  IFNNPRHPYTQALLSATP
Query Conservation 
   
 



  

 
 
Alig confidence 

















Template Conservation 
   
    

   
   
Template Sequence  LYHYPADRFVAGFIGSPK
Template Known Secondary structure 

SBTTSSSS
Template Predicted Secondary structure 









Template SS confidence 

















   1430.........1440.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions