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Job DescriptionP37313
Confidence100.00%DateThu Jan 5 11:55:10 GMT 2012
Rank54Aligned Residues213
% Identity19%Templatec2r6fA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:excinuclease abc subunit a; PDBTitle: crystal structure of bacillus stearothermophilus uvra
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
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Query Sequence  ALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIEMPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRK
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Template Sequence  VFASTNEAKVRGYKKGRFSFNVKGGRCEACHGDGIIKIEXHFLPDVYVPCEVCHGKR. . . . . . . . . . YNRETLEVTYKGK
Template Known Secondary structure  TSTT

TTTT
TTSTTTB
TTTTT
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SSS


TTTTT

..........B
TTGGG

BTTB
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   710.........720.........730.........740.........750.........760...... ...770.........
 
   117..120......... 130.........140.........150.........160.........170......... 180.........190..
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Query Sequence  KVGQILEEPLLIN. TSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLD. . . PDVVIADEPVSAL
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Template Sequence  NIAEVLDXTVEDALDFFASIPKIKRKLETLYDVGLGYXKLGQPATTLSGGEAQRVKLAAELHRRSNGRTLYILDEPTTGL
Template Known Secondary structure 
TSBT
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TT
SSSBTT

GGG

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TTTT
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   780.........790.........800.........810.........820.........830.........840.........850.........
 
   193......200.........210.........220.........230..... ....240.........250.........260.
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Query Sequence  DVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVM. . . . . . YLGRCVEKGTKDQIFNNPRHPYTQAL
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Template Sequence  HVDDIARLLDVLHRLVDN. GDTVLVIEHNLDVIKT. ADYIIDLGPEGGDRGGQIVAVGTPEEVAEVKESHTGRYL
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T.T



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   860.........870....... ..880.........890... ......900.........910.........920.........930..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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