Job Description P37313 Confidence 100.00% Date Thu Jan 5 11:55:10 GMT 2012 Rank 51 Aligned Residues 222 % Identity 27% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	T	L	Q	Q	P	L	L	Q	A	I	D	L	K	K	H	Y	P	V	K	K	G	M	F	A	P	E	R	L	V	K	A	L	D	G	V	S	F	N	L	E	R	G	K	T	L	A	V	V	G	E	S	G	C	G	K	S	T	L	G	R	L	L	T	M	I	E	M	P	T	G	G	E	L	Y	Y	Q	G	Q
Query Conservation
Alig confidence						.															.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation						.															.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Sequence		E	K	K	F	.	G	V	N	I	E	F	S	D	V	N	F	S	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	R	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K
Template Known Secondary structure			T	T	T	.															.	.	.	.	.	.	.	.	.	.	.	.		S										T	T								S	T	T	S	S									T	T	S	S				.						T	T
Template Predicted Secondary structure						.															.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
		11	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.													.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		D	L	L	K	H	D	P	Q	A	Q	K	L	R	R	Q	K	I	Q	I	V	F	Q	N	P	Y	G	S	L	N	P	R	K	K	V	G	Q	I	L	E	E	P	L	L	I	N	T	S	L	S	K	E	Q	R	R	E	K	A	L	S	M	M	A	K	V	G	L	K	T	E	H	Y	D	R	Y	.	P	H	M	F	S
Query Conservation																																																																												.
Alig confidence													.	.	.													.	.	.													.	.	.	.																														.
Template Conservation													.	.	.													.	.	.													.	.	.	.
Template Sequence		N	V	N	K	Y	N	R	N	S	I	R	.	.	.	S	I	I	G	I	V	P	Q	D	T	I	L	.	.	.	F	N	E	T	I	K	Y	N	I	L	Y	G	.	.	.	.	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S
Template Known Secondary structure			G	G	G	S							.	.	.	T	T						S	S				.	.	.		S	S	B							T	T	.	.	.	.	S	T	T													T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure													.	.	.													.	.	.													.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	Q	R	Q	R	I	A	I	A	R	G	L	M	L	D	P	D	V	V	I	A	D	E	P	V	S	A	L	D	V	S	V	R	A	Q	V	L	N	L	M	M	D	L	Q	Q	E	L	G	L	S	Y	V	F	I	S	H	D	L	S	V	V	E	H	I	A	D	E	V	M	V	M	Y	L	G	R	C	V	E	K
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.								.															.
Template Conservation																																.	.	.	.	.	.	.	.	.	.								.															.
Template Sequence		G	G	E	R	Q	R	I	A	I	A	R	C	L	L	K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	L	.	.	.	.	.	.	.	.	.	.	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K
Template Known Secondary structure																T			S													.	.	.	.	.	.	.	.	.	.								.									S	S	G	G	G	S	.	T	T		S							T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.								.															.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	K	D	Q	I	F	N	N	P	R	H	P	Y	T	Q	A	L	L	S	A
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		G	T	H	K	D	L	L	K	.	.	L	N	G	E	Y	A	E	M	W	N	M
Template Known Secondary structure										.	.		T	S								T
Template Predicted Secondary structure										.	.
Template SS confidence
		235	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions