Job Description P37313 Confidence 97.20% Date Thu Jan 5 11:55:10 GMT 2012 Rank 167 Aligned Residues 148 % Identity 14% Template c1lw7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcriptional regulator nadr; PDBTitle: nadr protein from haemophilus influenzae Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	V	V	G	E	S	G	C	G	K	S	T	L	G	R	L	L	T	M	I	E	M	P	T	G	G	E	L	Y	Y	Q	G	Q	D	L	L	K	H	D	P	Q	A	Q	K	L	R	R	Q	K	I	Q	I	V	F	Q	N	P	Y	G	S	L	N	P	R	K	K	V	G	Q	I	L	E	E	P	L	L	I	N	T
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		V	A	I	L	G	G	E	S	S	G	K	S	V	L	V	N	K	L	A	A	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	T	S	A	W	E	Y	G	R	E	.	.	.	F	V	F	E	K	L	G	G	D	E	Q	A	M	Q	Y	S	D	Y	P	Q	X	A	L	G	H	Q	R
Template Known Secondary structure								T	T	S													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T			.	.	.					S	S	S	S		T	T	S	S		T	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250																		.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	S	K	E	Q	R	R	E	K	A	L	S	M	M	A	K	V	G	L	K	T	E	H	Y	D	R	Y	P	H	M	F	S	G	G	Q	R	Q	R	I	A	I	A	R	G	L	M	L	D	P	D	V	V	I	A	D	E	P	V	S	A	L	D	V	S	V	R	A	Q	V	L	N	L	M	M	D	L	Q	Q	E
Query Conservation
Alig confidence																													.	.	.	.																														.	.
Template Conservation																													.	.	.	.																														.	.
Template Sequence		Y	I	D	Y	A	V	R	H	S	H	K	I	A	F	I	D	T	D	F	I	T	T	Q	A	F	C	I	.	.	.	.	Q	Y	E	G	K	A	H	P	F	L	D	S	X	I	K	E	Y	P	F	D	V	T	I	L	L	K	N	N	T	.	.	E	Q	K	Q	R	Q	Q	F	Q	Q	L	L	K	K	L	L	D	K
Template Known Secondary structure											S	S					S	S											.	.	.	.				S													S			S										.	.				S														G
Template Predicted Secondary structure																													.	.	.	.																														.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		211	.	.	.	.	.	.	.	.	220		.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	G	L	S	Y	V	F	I	S	H	.	D	L	S	V
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		Y	K	V	P	Y	I	E	I	E	S	P	S	Y	L	D
Template Known Secondary structure		G	G									S	S
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions