Job Description P0A917 Confidence 97.23% Date Thu Jan 5 11:09:11 GMT 2012 Rank 30 Aligned Residues 115 % Identity 16% Template d3prna_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.90

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	G	G	Y	A	Q	S	D	A	Q	G	Q	M	N	K	M	G	G	F	N	L	K	Y	R	Y	E	E	D	N	S	P	L	G	V	I	G	S	F	T	Y	T	E	K	S	R	T	A	S	S	G	D	Y	N	K	N	Q	Y	Y	G	I	T	A	G	P	A	Y	R	I	N	D	W	A	S	I	Y	G	V	V	G
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		I	S	L	A	A	A	Y	T	T	D	A	G	G	I	V	D	N	D	I	A	F	V	G	A	A	Y	K	F	N	D	A	G	T	V	G	L	N	W	Y	D	N	G	L	S	T	A	G	D	Q	.	.	.	.	.	.	.	.	.	.	.	V	T	L	Y	G	N	Y	A	F	G	A	.	T	T	V	R	A	Y	V	S
Template Known Secondary structure											S	G	G	G		T	T													S	S	S											T	T	S	T	T		S		.	.	.	.	.	.	.	.	.	.	.										T	T	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.												.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Y	G	K	F	Q	T	T	E	Y	P	T	Y	K	H	D	T	S	D	Y	G	F	S	Y	G	A	G	L	Q	F	N	P	M	E	N	V	A	L	D	F	S	Y	E	Q	S	R	I	R	S	V	D	V	G	T	W	I	A	G	V	G	Y	R	F
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	A	G	A	D	T	A	Y	G	I	G	A	D	Y	Q	F	A	E	G	V	K	V	S	G	S	V	Q	S	.	.	.	G	F	A	N	E	T	V	A	D	V	G	V	R	F	D	F
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T															T	T										.	.	.		T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
		243	.															.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions