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Job Description | P0A917 | Confidence | 94.61% | Date | Thu Jan 5 11:09:11 GMT 2012 |
Rank | 35 | Aligned Residues | 123 |
% Identity | 7% | Template | d2gufa1 |
SCOP info | Transmembrane beta-barrels
| Porins
| Ligand-gated protein channel
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Resolution | 1.95 |
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46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | F | N | L | K | Y | R | Y | E | E | D | N | S | P | L | G | V | I | G | S | F | T | Y | T | E | K | S | R | T | A | S | S | G | D | Y | N | K | N | Q | Y | Y | G | I | T | A | G | P | A | Y | R | I | N | D | W | A | S | I | Y | G | V | V | G | V | G | Y | G | K | F | Q | T | T | E | Y | P | T | Y | K | H | D | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | V | E | A | T | A | N | F | D | T | G | P | . |
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L | T | H | T | V | S | Y | D | Y | V | D | A | R | N | A | I | T | D | T | P | L | L | R | R | A | K | Q | Q | V | K | Y | Q | L | D | W | Q | L | . |
Y | D | F | D | W | G | I | T | Y | Q | Y | L | G | T | R | Y | D | K | D | Y | S | S | Y | P | Y | Q | T | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
463 | . | . | . | . | . | . | 470 | . | . | . | . | |
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. | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | |
. | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . |
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126 | . | . | . | 130 | . | |
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | D | Y | G | F | S | . |
Y | G | A | G | L | Q | F | N | P | M | E | N | V | A | L | D | F | S | Y | E | Q | S | R | I | R | S | V | D | V | G | T | W | I | A | G | V | G | Y | R | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | M | G | G | V | S | L | W | D | L | A | V | A | Y | P | V | T | S | H | L | T | V | R | G | K | I | A | N | L | F | D | K | D | Y | A | G | R | E | Y | T | L | S | G | S | Y | T | F |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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