Return to main results Retrieve Phyre Job Id

Job DescriptionP0A917
Confidence98.37%DateThu Jan 5 11:09:11 GMT 2012
Rank24Aligned Residues135
% Identity19%Templatec3qq2C_
PDB info PDB header:membrane protein/protein transportChain: C: PDB Molecule:brka autotransporter; PDBTitle: crystal structure of the beta domain of the bordetella autotransporter2 brka
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60....... ..70.........80...
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Query Sequence  VTGGYAQSDAQGQMNKMGGFNLKYRYEEDNSPLGVIGSFT. . . . . . . . . . . . . . . . . . . . . . . . YTEKSRTASSGDYNKN
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Template Sequence  TVLRLGRYDQQYNIAGTDGGRVTADYRTSGAAWSLEGGRRFELPNDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTA
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   834.....840.........850.........860.........870.........880.........890.........900.........910...
 
   84.....90......... 100.........110.........120.........130.........140.........150.........
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Query Sequence  QYYGITAGPAYRINDW. . . . ASIYGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVD
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Template Sequence  TLGRLGLRFGRRIALAGGNIVQPYARLGWTQE. . . . . . . . . FKSTGRHGRVELGAGVDAALGKGHNLYASYEYAAGDRIN
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   914.....920.........930.........940..... ....950.........960.........970.........980....
 
   160. ........170.
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Query Sequence  VG. TWIAGVGYRF
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Template Sequence  IPWSFHAGYRYSF
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B

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   998.1000.........1010
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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