Job Description P0A917 Confidence 98.10% Date Thu Jan 5 11:09:11 GMT 2012 Rank 26 Aligned Residues 134 % Identity 7% Template c3brzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx Resolution 3.20 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	G	Y	A	Q	S	D	A	Q	G	Q	M	N	K	M	G	G	F	N	L	K	Y	R	Y	E	E	D	N	S	P	L	G	V	I	G	S	F	T	Y	T	E	K	S	R	T	A	S	S	G	D	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	Q	Y	Y	G	I	T	A	G	P	A
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.
Template Sequence		V	L	P	L	D	G	D	I	R	V	K	N	F	E	M	P	A	S	L	T	L	G	L	A	H	Q	F	N	E	R	.	W	V	V	A	A	D	I	K	R	A	Y	W	G	D	V	M	D	S	M	N	V	A	F	I	S	Q	L	G	G	I	D	V	A	L	P	H	R	Y	Q	D	I	T	V	A	S	I	G	T	A
Template Known Secondary structure																B												S	S	S	S	.													T	T			S									S	S
Template Predicted Secondary structure																																.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		Y	R	I	N	D	W	A	S	I	Y	G	V	V	G	V	G	Y	G	K	F	Q	T	T	E	Y	P	T	Y	K	H	D	T	S	D	Y	G	F	S	Y	G	A	G	L	Q	F	N	P	M	E	N	V	A	L	D	F	S	Y	E	Q	S	R	I	R	S	V	D	V	G	.	.	.	.	.	.	T	W	I	A	G	V
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		Y	K	Y	N	N	D	L	T	L	R	A	G	Y	S	Y	A	Q	L	I	.	.	.	.	.	.	.	.	L	P	V	I	P	A	Y	L	K	R	H	V	T	F	G	G	E	Y	D	F	D	K	D	S	R	I	N	L	A	I	S	F	G	L	R	E	R	V	M	L	R	Q	S	H	S	Q	I	N	A	V	V	S	Y
Template Known Secondary structure				S	S	S	S														.	.	.	.	.	.	.	.		T	T	S					S											S	S	S	S																							B
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360									.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		168	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	N	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions