Job Description P0A917 Confidence 2.31% Date Thu Jan 5 11:09:11 GMT 2012 Rank 76 Aligned Residues 140 % Identity 11% Template c2qtkB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable porin; PDBTitle: crystal structure of the outer membrane protein opdk from2 pseudomonas aeruginosa Resolution 2.80 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.																.	80	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	T	G	G	Y	A	Q	S	D	A	Q	G	Q	M	N	.	.	.	.	K	M	G	G	F	N	L	K	Y	R	Y	E	E	D	N	S	P	L	G	V	I	G	S	F	T	Y	T	E	K	S	R	T	A	S	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	N	K	N	Q	Y	Y	G
Query Conservation																		.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.
Template Sequence		G	A	N	L	G	L	F	V	D	R	D	D	G	A	A	R	A	G	E	I	D	S	H	T	V	Y	G	L	F	S	A	G	I	G	L	.	.	H	T	F	Y	L	G	L	Q	K	V	G	G	D	S	G	W	Q	S	V	Y	G	S	S	G	R	S	M	G	N	D	M	F	N	G	N	F	T	N	A	D	E	R	S
Template Known Secondary structure														T	T		T	T																	T	T	.	.													S	S					B	T	T			G	G	G	S	T	T		B	T	T	B				S	B	T
Template Predicted Secondary structure																																					.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.
Predicted Secondary structure																																																								.	.	.	.																.
Query SS confidence																																																								.	.	.	.																.
Query Sequence		I	T	A	G	P	A	Y	R	I	N	D	W	A	S	I	Y	G	V	V	G	V	G	Y	G	K	F	Q	T	T	E	Y	P	T	Y	K	H	D	T	S	D	Y	G	F	S	Y	G	A	G	L	Q	F	N	P	M	.	.	.	.	E	N	V	A	L	D	F	S	Y	E	Q	S	R	I	R	.	S	V	D	V	G	T
Query Conservation																																																								.	.	.	.																.
Alig confidence																																									.	.	.													.	.	.	.																.
Template Conservation																																									.	.	.
Template Sequence		W	Q	V	R	Y	D	Y	D	F	V	G	L	G	W	P	G	L	I	G	M	V	R	Y	G	H	G	S	N	A	T	T	K	A	G	S	G	G	K	E	.	.	.	W	E	R	D	V	E	L	G	Y	T	V	Q	S	G	P	L	A	R	L	N	V	R	L	N	H	A	S	N	R	R	S	F	N	S	D	F	D	Q
Template Known Secondary structure										G	G	G	G	T		T	T														B		S	S		S					.	.	.													S	S	S	S	T	T													S	S	S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.				.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	A	G	V	G	Y	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	L	V	V	S	Y	P	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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