Job Description P0A917 Confidence 6.64% Date Thu Jan 5 11:09:11 GMT 2012 Rank 66 Aligned Residues 110 % Identity 18% Template c2k4tA_ PDB info PDB header:membrane protein,apoptosis Chain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles Resolution UNK

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																.	.																			.
Query SS confidence																.	.																			.
Query Sequence		V	T	G	G	Y	A	Q	S	D	A	Q	G	Q	M	.	.	N	K	M	G	G	F	N	L	K	Y	R	Y	E	E	D	N	S	P	.	L	G	V	I	G	S	F	T	Y	T	E	K	S	R	T	A	S	S	G	D	Y	N	K	N	Q	Y	Y	G	I	T	A	G	P	A	Y	R	I	N	D	W	A	S	I	Y	G
Query Conservation																.	.																			.
Alig confidence																.	.																			.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	V	G	Y	K	T	D	E	F	Q	L	H	T	N	V	N	D	G	T	E	F	G	G	S	I	Y	Q	K	V	N	K	K	L	E	T	A	V	N	L	A	W	T	A	G	N	S	N	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	I	A	A	K	Y	Q	I	D	P	D	A	C	F	S	A
Template Known Secondary structure									S	S									T	T	T											S	T	T											T	T	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.														.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	V	G	Y	G	K	F	Q	T	T	E	Y	P	T	Y	K	H	D	T	S	D	Y	G	F	S	Y	G	A	G	L	Q	F	N	P	M	E	N	V	A	L	D	F	S	Y	E	Q	S	R	I	R	S	V	D	V	G	T	W	I	A	G	V	G	Y	R	F
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		K	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	S	L	I	G	L	G	Y	T	Q	T	L	K	P	G	I	K	L	T	L	S	A	L	.	L	D	G	K	N	V	N	A	G	G	H	K	L	G	L	G	L	E	F
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S											S	S	S									.		S	T	T		G	G	G	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		236	.	.																					.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions