Job Description P0A917 Confidence 99.85% Date Thu Jan 5 11:09:11 GMT 2012 Rank 10 Aligned Residues 143 % Identity 17% Template c2jmmA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein Resolution UNK

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	T	S	T	V	T	G	G	Y	A	Q	S	D	A	Q	G	Q	M	N	K	M	G	G	F	N	L	K	Y	R	Y	E	E	D	N	S	P	L	G	V	I	G	S	F	T	Y	T	E	K	S	R	T	A	S	S	G	D	Y	N	K	N	Q	Y	Y	G	I	T	A	G	P	A	Y	R	I	N	D	W	A	S
Query Conservation
Alig confidence																																							.												.	.	.	.	.
Template Conservation																																							.												.	.	.	.	.
Template Sequence		M	P	K	D	N	T	W	Y	T	G	A	K	L	G	W	S	Q	Y	S	R	E	N	Q	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	.	V	G	F	E	M	G	Y	D	W	L	G	.	.	.	.	.	R	M	P	R	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	K	L	G	T	D	D	L	D
Template Known Secondary structure					S	S												T	T			S	S													S	S	S	.												.	.	.	.	.	S	S	S	S															T	T		T	T	T
Template Predicted Secondary structure																																							.												.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																						.	.	.																		.	.	.	.
Query SS confidence																						.	.	.																		.	.	.	.
Query Sequence		I	Y	G	V	V	G	V	G	Y	G	K	F	Q	T	T	E	Y	P	T	Y	.	.	.	K	H	D	T	S	D	Y	G	F	S	Y	G	A	G	L	Q	F	.	.	.	.	N	P	M	E	N	V	A	L	D	F	S	Y	E	Q	S	R	I	R	S	V	D	V	G	T	W	I	A	G	V	G	Y	R	F
Query Conservation																						.	.	.																		.	.	.	.
Alig confidence																						.	.	.																		.	.	.	.																				.
Template Conservation																																																																	.
Template Sequence		I	Y	T	R	L	G	G	M	V	W	R	A	D	T	S	D	K	D	G	N	G	Y	I	S	A	A	E	A	S	V	S	P	V	F	A	G	G	V	E	Y	V	I	R	R	R	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	N	A	S	.	D	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure												S	S	B						S	S	S						B																S	S	S		S	S	S											S	S	S	S	.													S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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