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Job DescriptionP39315
Confidence100.00%DateThu Jan 5 11:59:18 GMT 2012
Rank8Aligned Residues274
% Identity17%Templated1xgka_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50........ .60.........70.......
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Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA. . . QGITVRQADYGDEAA. LTSALQGVEKLLLISSSEV
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Template Sequence  IAVVGATGRQGASLIRVAAAV. . GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQA
Template Known Secondary structure  STTST..T

S
S
STSTTS

TT
TT
S


STT
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   8.10.........20........ .30.........40.........50.........60.........70.........80.....
 
   78.80.........90.........100......... 110.........120.........130.........140.......
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Query Sequence  GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT. . . . . SPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLAS. . . . .
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Template Sequence  GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLF
Template Known Secondary structure  S
S

S


GGGTSS



TTTTSSS

GGG
BSSS
SS
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   148.150.........160.........170.........180.. .......190.........200.........210.........220..
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Query Sequence  . . . APAALEHGVFIGAAGDGKIASATRADYAAAAARVI. . SEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNL
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Template Sequence  QMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRVTYVQV
Template Known Secondary structure  B
TTS
SS
TTS


TT

S
TS

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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   223......230.........240.........250. ........260.........270.........280..
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Query Sequence  SEADFAAALKSVGLPDGLADMLADSDVGA. . . . . . . . . . . . . . SKGGLFDDSKTLSKLIGHPTTTLAESVSHLF
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Template Sequence  PKVEI. . . . . KVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSPGGVISQRVTDEARKLWSGWRDMEEYAREVF
Template Known Secondary structure  SS


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TTS


SS
SGGG

TT




TT
TT


T
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   246...250 .........260.........270.........280.........290.........300.........310....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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