|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | |
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. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
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|
Predicted Secondary structure |   |
 |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
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|
|  |  |  |  |
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|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
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| . |
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| . |
. |
. |
. |
. |
. |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
I | A | I | T | G | A | T | G | Q | L | G | H | Y | V | I | E | S | L | M | K | T | V | P | A | S | Q | I | V | A | I | V | . |
R | N | P | A | K | A | Q | A | L | A | . |
. |
. |
. |
. |
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. |
A | Q | G | I | T | V | R | Q | A | D | Y | G | D | E | . |
. |
. |
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. |
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. |
Query Conservation |   |
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|   |
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|   |   |
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|   |   |
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|   |   |   |   |
|   |   |
|   |   |
|   | . |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
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| . | . |
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| . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
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|   |
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|   |
|   |
|   |   |
|
|   |   | . | . |
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|   |
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|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | L | V | T | G | A | A | K | R | L | G | S | S | I | A | E | A | L | H | A | E | . |
. |
G | Y | T | V | C | L | H | Y | H | R | S | A | A | D | A | S | T | L | A | A | T | L | N | A | R | R | P | N | S | A | I | T | V | Q | A | D | L | S | N | V | A | T | A | S | S | V | P | V | T | L | F | S | R | C | S | A | L |
Template Known Secondary structure |   |
 |  |  | T | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | T |
|  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|  |  |  |  |  |
|
|
| S | S | S |
| B |
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|
| B |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
|
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
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. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
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. | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |
|
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|  |  |  |  |
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
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|
Query SS confidence |   |
. |
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| . |
. |
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| . |
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. |
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Query Sequence |   |
. |
A | A | L | T | S | A | L | Q | G | V | E | K | L | L | L | I | S | S | S | E | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
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. |
G | Q | R | A | P | Q | H | R | N | V | I | N | A | A | K | A | A | G | V | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | I | A | Y | T | S | L | L | H |
Query Conservation |   |
. |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|   |   |
Alig confidence |   |
. |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . |
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
V | D | A | C | Y | M | H | W | G | R | C | D | V | L | V | N | N | A | S | S | F | Y | P | T | P | L | L | R | D | K | E | S | L | E | V | A | A | A | D | L | F | G | S | N | A | I | A | P | Y | F | L | I | K | A | F | A | Q | R | V | A | D | T | R | A | E | Q | R | G | T | S | Y | S | I | V | N | M | V | D | A | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |
|
|
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|
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|
| S |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
| G | G | G |
|
| S |
|
|  |  |  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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Template SS confidence |   |
|
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  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
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|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |
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|
| . | . | . | . | . | . |
|
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|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
. |
. |
. |
. |
. |
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Query Sequence |   |
A | D | T | S | P | L | G | L | A | D | E | H | I | E | T | E | K | M | L | A | D | S | G | I | V | Y | T | L | L | R | N | G | W | Y | S | E | N | Y | L | A | S | A | P | A | A | L | E | H | G | V | F | I | G | A | A | G | D | G | K | . |
. |
. |
. |
. |
. |
I | A | S | A | T | R | A | D | Y | A | A | A | A | A | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . |
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|   |   |
|   |   |
Template Sequence |   |
T | S | Q | P | L | L | G | Y | T | M | Y | T | M | A | K | E | A | L | E | G | L | T | R | S | A | A | L | E | L | A | S | L | Q | I | R | V | N | G | V | S | P | G | L | S | V | L | P | D | D | M | P | F | S | V | Q | E | D | Y | R | R | K | V | P | L | Y | Q | R | N | S | S | A | E | E | V | S | D | V | V | I | F |
Template Known Secondary structure |   |
S | S | S |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|  |  |  |  |  |  |  | S | S | B | S |
|
| S | S |
|
|  |  |  |  |  |  |  |  | T | T |
| T | T | T | T | S |
| B |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
  |
  |   |
181 | . | . | . | . | . | |
|
. | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
| . | . |
|
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|
|  |  |  |  |  |
|
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|
Query SS confidence |   |
|
|
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| . |
. |
|
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|
Query Sequence |   |
V | I | S | E | A | G | . |
. |
H | E | G | K | V | Y | E | L | A | G | D | S | A | W | T |
Query Conservation |   |
  |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
| . | . |
|
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|
|
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|
Template Conservation |   |
|   |
|   |   |
|   |   |
|
|
|   |   |
|   |
|
|
|
|   |
|
|   |
Template Sequence |   |
L | C | S | P | K | A | K | Y | I | T | G | T | C | I | K | V | D | G | G | Y | S | L | T |
Template Known Secondary structure |   |
 |  | S | G | G | G | T | T |
|
| S |
|  |  |  |  | S | T | T | G | G | G |
|
Template Predicted Secondary structure |   |
 |  |
|  |  |  |
|
|
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|
|
|  |  |  |  |
|
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|
Template SS confidence |   |
|
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|
|
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|
  |   |
264 | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
  |