Return to main results Retrieve Phyre Job Id

Job DescriptionP39315
Confidence99.36%DateThu Jan 5 11:59:18 GMT 2012
Rank88Aligned Residues106
% Identity15%Templated1mlda1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution1.83

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40 .........50.........60.........70.......
Predicted Secondary structure 










..

















..
Query SS confidence 






































. .




































. .
Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA. . LAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV. .
Query Conservation 







 

  

  

    
  
  
 
       ..     
  
  
  
      
               ..
Alig confidence 






































..




































..
Template Conservation 
 



 
 

  
   
   
    
 
 
                                    



  

     
Template Sequence  VAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKP
Template Known Secondary structure  TTTSTTT
TT
SSSSTTSSSS
SGGGTT
S

S



T
Template Predicted Secondary structure 































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   78.80.........90.........100.......
Predicted Secondary structure  ........







Query SS confidence  . . . . . . . .





























Query Sequence  . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHA
Query Conservation  ........                      
  

   
Alig confidence  ........





























Template Conservation            
         
         
 
 



Template Sequence  GMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV
Template Known Secondary structure  T

GGGG
TTS
SS
Template Predicted Secondary structure 









Template SS confidence 





































   83......90.........100.........110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions