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Job DescriptionP39315
Confidence98.67%DateThu Jan 5 11:59:18 GMT 2012
Rank140Aligned Residues198
% Identity16%Templated1k2wa_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50.........60.........70.......
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Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA. . . QGITVRQADYGDEAALTSALQGVEKLLLISSSEV.
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Template Sequence  ALITGSARGIGRAFAEAYVRE. . GARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVN
Template Known Secondary structure  T
SST..TS

TT

TT
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   8.10.........20........ .30.........40.........50.........60.........70.........80.....
 
   78.80.........90.........100.........110..... ....120
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLA. . . . . . . . . . DEHIE
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Template Sequence  NAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQS
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GGG

TTS


GGGTS

TT
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   121........130.........140.........150.........160....... ..170.........180.. .......190
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Query Sequence  TEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIA. . . . . . . . SATRADYAAAAARVI. . SEAGHEGK
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Template Sequence  AGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQ
Template Known Secondary structure  GGGT

B

TTT

TTSTTSS
B
TTSGGGTT

S
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   191........200.
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Query Sequence  VYELAGDSAWT
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Template Sequence  TYNVDGGNWMS
Template Known Secondary structure  STTSS

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   246...250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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