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Job DescriptionP39315
Confidence99.95%DateThu Jan 5 11:59:18 GMT 2012
Rank31Aligned Residues270
% Identity17%Templated1db3a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGV. . EKLLLISSSEV. .
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Template Sequence  ALITGVTGQDGSYLAEFLLEK. . GYEVHGIKRP. . . . . . . . . . KFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVA
Template Known Secondary structure  TTTST..T



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   4.....10.........20.... .....30.... .....40.........50.........60.........70.
 
   78.80.........90.........100.........110..... ....120......
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Query Sequence  . . . . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLA. . . . . . . . . . . . . . . . . . DEHIETEKMLA
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Template Sequence  VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRE
Template Known Secondary structure  TTTS
TTT
TTT
GGGGTT

SSSB
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   127..130.........140.........150. ........160.........170.........180.........190....
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Query Sequence  DSGIVYTLLRNGWYSENYLASAPAA. . . . . . . . . . . . LEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYEL
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Template Sequence  SYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ. . PEDFVI
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   173......180.........190.........200.........210.........220.........230.........240.... .....250
 
   195....200.........210.........220.........230.........240.... .....250.........260........
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Query Sequence  AGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADML. . . . . . ADSDVGASKGGLFDDSKTLSKLIG
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Template Sequence  ATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEETLLGDPTKAHEKLG
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TTTS
GGG

SSS
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   251........260.........270.........280.........290.........300.........310.........320.........330
 
   269270.. .......280.....
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Query Sequence  HPTT. TLAESVSHLFNVN
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Template Sequence  WKPEITLREMVSEMVAND
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   332.......340.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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