Job Description P39315 Confidence 95.73% Date Thu Jan 5 11:59:18 GMT 2012 Rank 482 Aligned Residues 75 % Identity 17% Template c5mdhB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of ternary complex of porcine cytoplasmic malate2 dehydrogenase alpha-ketomalonate and tnad at 2.4 angstroms resolution Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.												.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.												.	.	.	.	.	.
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	.	.	.	.	.	.	.	Q	I	V	A	I	V	R	N	P	A	K	.	.	.	.	.	.	A	Q	A	L	A	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	L	Q	G	V	E	K
Query Conservation																											.	.	.	.	.	.	.												.	.	.	.	.	.
Alig confidence																							.	.			.	.	.	.	.	.	.												.	.	.	.	.	.														.
Template Conservation																							.	.																																								.
Template Sequence		V	L	V	T	G	A	A	G	Q	I	A	Y	S	L	L	Y	S	I	G	N	G	.	.	S	V	F	G	K	D	Q	P	I	I	L	V	L	L	D	I	T	P	M	M	G	V	L	D	G	V	L	M	E	L	Q	D	C	A	L	P	L	L	K	.	D	V	I	A	T	D	K	E	E	I	A	F	K	D	L	D	V
Template Known Secondary structure						S	T	T	S	T											T	T	.	.	T	T	T		T	T											G	G	G														T			T	T			.						S						T	T	T		S
Template Predicted Secondary structure																							.	.																																								.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		69	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	I	S	S	S	E	V	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	L	V	G	S	M	P	R	R	D
Template Known Secondary structure							S					S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions