Job Description P39315 Confidence 98.66% Date Thu Jan 5 11:59:18 GMT 2012 Rank 141 Aligned Residues 186 % Identity 18% Template c3v2hB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-beta-hydroxybutyrate dehydrogenase; PDBTitle: the crystal structure of d-beta-hydroxybutyrate dehydrogenase from2 sinorhizobium meliloti Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.								.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	.	.	.	.	.	.	.	.	L	A	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	L	Q	.	.	.	.	.	.	.	G	V
Query Conservation																																									.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Alig confidence																							.	.																	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		A	V	I	T	G	S	T	S	G	I	G	L	A	I	A	R	T	L	A	K	A	.	.	G	A	N	I	V	L	N	G	F	G	A	P	D	E	I	R	T	V	T	D	E	V	A	G	L	S	S	G	T	V	L	H	H	P	A	D	X	T	K	P	S	E	I	A	D	X	X	A	X	V	A	D	R	F	G	G	A
Template Known Secondary structure						S		S	S													T	.	.	T							S																T	T		S	S									T	T																	S	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		67	.	.	70	.	.	.	.	.	.	.																					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	L	L	L	I	S	S	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	R	A	P	Q	H	R	N	V	I	N	A	A	K	A	A	G	V	K	F	I	A	Y	T	S	L	L	H	A	D	T	S	P	L	G	L	A	D	E	H	I	E	T	E	K	M	L	A
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	L	V	N	N	A	G	V	Q	F	V	E	K	I	E	D	F	P	V	E	Q	W	D	R	I	I	A	V	N	L	S	S	S	F	H	T	I	R	G	A	I	P	P	X	K	K	K	G	W	G	R	I	I	N	I	A	S	A	H	G	L	V	A	S	P	F	K	S	A	Y	V	A	A	K	H	G	I	X	G
Template Known Secondary structure		S														G	G	G														T																		T										G	G	G	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		D	S	G	I	V	Y	T	L	L	R	N	G	W	Y	S	E	N	Y	L	A	S	A	P	A	A	L	E	H	G	V	F	I	G	A	A	G	D	G	K	I	A	S	A	T	R	A	D	Y	A	A	A	A	A	R	V	I	S	E	A	G	H	E	.	.	G	K	V	Y	E	L	A	G	D	S	A
Query Conservation																																																																.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	K	T	V	A	L	E	V	A	E	S	G	V	T	V	N	S	I	C	P	G	Y	V	.	.	.	.	.	.	.	.	.	.	L	G	Q	P	T	K	K	F	I	T	V	E	Q	V	A	S	L	A	L	Y	L	A	G	D	D	A	A	Q	I	T	G	T	H	V	S	X	D	G	G	W	T
Template Known Secondary structure										T	G	G	G	T										S	B	.	.	.	.	.	.	.	.	.	.				T	T		S		B														S	G	G	G	G	G			S						S	T	T	S	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.											.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions