Job Description P39315 Confidence 98.59% Date Thu Jan 5 11:59:18 GMT 2012 Rank 163 Aligned Residues 198 % Identity 16% Template c3uf0A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a putative nad(p) dependent gluconate 5-2 dehydrogenase from beutenbergia cavernae(efi target efi-502044) with3 bound nadp (low occupancy) Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	L	A	.	.	.	.	.	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	L	Q	G	V	E	K	L	L	L	I	S	S	S	E
Query Conservation																																											.	.	.	.	.
Alig confidence																							.	.																			.	.	.	.	.
Template Conservation																							.	.
Template Sequence		A	V	V	T	G	A	G	S	G	I	G	R	A	I	A	H	G	Y	A	R	A	.	.	G	A	H	V	L	A	W	G	R	T	D	G	V	K	E	V	A	D	E	I	A	D	G	G	G	S	A	E	A	V	V	A	D	L	A	D	L	E	G	A	A	N	V	A	E	E	L	A	A	T	R	R	V	D	V	L	V
Template Known Secondary structure						T	T	T	S													T	.	.	T								S	S	T											T	T	T										T	T																S
Template Predicted Secondary structure																							.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		77																											.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	R	A	P	Q	H	R	N	V	I	N	A	A	K	A	A	G	V	K	F	I	A	Y	T	S	L	L	H	A	D	T	S	P	L	G	L	A	D	E	H	I	E	T	E	K	M	L	A	D	S	G	I
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	A	G	I	I	A	R	A	P	A	E	E	V	S	L	G	R	W	R	E	V	L	T	V	N	L	D	A	A	W	V	L	S	R	S	F	G	T	A	M	L	A	H	G	S	G	R	I	V	T	I	A	S	M	L	S	F	Q	G	G	R	N	V	A	A	Y	A	A	S	K	H	A	V	V	G	L	T	R	A
Template Known Secondary structure												G	G	G														T																		T										G	G	G	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.										.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.																.	.
Query Sequence		V	Y	T	L	L	R	N	G	W	Y	S	E	N	Y	L	A	S	A	P	A	A	L	E	H	G	V	F	I	G	A	A	G	D	G	K	I	A	.	.	.	.	.	.	.	.	.	S	A	T	R	A	D	Y	A	A	A	A	A	R	V	I	.	.	S	E	A	G	H	E	G	K	V	Y	E	L	A	G	D	S	A
Query Conservation																																							.	.	.	.	.	.	.	.	.																.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		L	A	S	E	W	A	G	R	G	V	G	V	N	A	L	A	P	G	Y	V	V	T	A	N	T	A	A	L	R	A	D	D	E	R	A	A	E	I	T	A	R	I	P	A	G	R	W	A	T	P	E	D	M	V	G	P	A	V	F	L	A	S	D	A	A	S	Y	V	H	G	Q	V	L	A	V	D	G	G	W	L
Template Known Secondary structure							G	G	G	T										S	B		S	G	G	G					T	S											S	T	T	S	S		B		G	G	G	G									S	G	G	G	T	T			S						S	T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		250	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions