Job Description P39315 Confidence 98.29% Date Thu Jan 5 11:59:18 GMT 2012 Rank 246 Aligned Residues 195 % Identity 11% Template c3rkuC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:oxidoreductase ymr226c; PDBTitle: substrate fingerprint and the structure of nadp+ dependent serine2 dehydrogenase from saccharomyces cerevisiae complexed with nadp+ Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																										.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	.	.	.	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	L	A	.	.	.	.	.	.	.	.	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	L	Q	G	V	E	K	L	L
Query Conservation																										.	.	.																		.	.	.	.	.	.	.	.
Alig confidence																							.	.		.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		V	L	I	T	G	A	S	A	G	I	G	K	A	T	A	L	E	Y	L	E	A	.	.	S	N	G	D	M	K	L	I	L	A	A	R	R	L	E	K	L	E	E	L	K	K	T	I	D	Q	E	F	P	N	A	K	V	H	V	A	Q	L	D	I	T	Q	A	E	K	I	K	P	F	I	E	N	L	P	Q	E	F
Template Known Secondary structure						S	T	T	S													T	.	.	T	T	T									S																	T	T										T	T											T	S		G	G	G
Template Predicted Secondary structure																							.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		71	.	.	.	.	.	.																													.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Query Sequence		L	I	S	S	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	R	A	P	Q	H	R	N	V	I	N	A	A	K	A	A	G	V	K	F	I	A	Y	T	S	L	L	H	A	D	T	S	P	L	G	L	A	D	E	.	.	.	.	.
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template Conservation
Template Sequence		K	D	I	D	I	L	V	N	N	A	G	K	A	L	G	S	D	R	V	G	Q	I	A	T	E	D	I	Q	D	V	F	D	T	N	V	T	A	L	I	N	I	T	Q	A	V	L	P	I	F	Q	A	K	N	S	G	D	I	V	N	L	G	S	I	A	G	R	D	A	Y	P	T	G	S	I	Y	C	A	S	K	F
Template Known Secondary structure			S																	T	T	S														T																		T										G	G	G	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
				118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.
Predicted Secondary structure		.	.																																																																						.	.
Query SS confidence		.	.																																																																						.	.
Query Sequence		.	.	H	I	E	T	E	K	M	L	A	D	S	G	I	V	Y	T	L	L	R	N	G	W	Y	S	E	N	Y	L	A	S	A	P	A	A	L	E	H	G	V	F	I	G	A	A	G	D	G	K	I	A	S	A	T	R	A	D	Y	A	A	A	A	A	R	V	I	S	E	A	G	.	.	H	E	G	K	V	Y	E
Query Conservation		.	.																																																																						.	.
Alig confidence		.	.																																																																						.	.
Template Conservation
Template Sequence		A	V	G	A	F	T	D	S	L	R	K	E	L	I	N	T	K	I	R	V	I	L	I	A	P	G	L	V	E	T	E	F	S	L	V	R	Y	R	G	N	E	E	Q	A	K	N	V	Y	K	D	T	T	P	L	M	A	D	D	V	A	D	L	I	V	Y	A	T	S	R	K	Q	N	T	V	I	A	D	T	L	I
Template Known Secondary structure														T	T	T	S	S									S				S	S						T	T	T										T	T	S																	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		194	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	T	N	Q
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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