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Job DescriptionP39315
Confidence98.29%DateThu Jan 5 11:59:18 GMT 2012
Rank246Aligned Residues195
% Identity11%Templatec3rkuC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:oxidoreductase ymr226c; PDBTitle: substrate fingerprint and the structure of nadp+ dependent serine2 dehydrogenase from saccharomyces cerevisiae complexed with nadp+
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20..... ....30.........40.. .......50.........60.........70
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Query Sequence  IAITGATGQLGHYVIESLMKTVPA. . . SQIVAIVRNPAKAQALA. . . . . . . . AQGITVRQADYGDEAALTSALQGVEKLL
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Template Sequence  VLITGASAGIGKATALEYLEA. . SNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF
Template Known Secondary structure  STTST..TTT

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Query Sequence  LISSSEV. . . . . . . . . . . . . . . . . . . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADE. . . . .
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Template Sequence  KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKF
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Query Sequence  . . HIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG. . HEGKVYE
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Template Sequence  AVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQNTVIADTLI
Template Known Secondary structure  TTTSSS
SSTTT
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   174.....180.........190.........200.........210.........220.........230.........240.........250...
 
   194....
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Query Sequence  LAGDS
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Template Sequence  FPTNQ
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   254....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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