Job Description P39315 Confidence 99.91% Date Thu Jan 5 11:59:18 GMT 2012 Rank 70 Aligned Residues 184 % Identity 23% Template c3qvoA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nmra family protein; PDBTitle: structure of a rossmann-fold nad(p)-binding family protein from2 shigella flexneri. Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	L	A	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	L	Q	G	V	E	K	L	L	L	I	S	S	S	E	V	G	Q	R	A
Query Conservation
Alig confidence																								.																																																					.	.
Template Conservation																								.																																																					.	.
Template Sequence		V	L	I	L	G	A	G	G	Q	I	A	R	H	V	I	N	Q	L	A	D	K	Q	.	T	I	K	Q	T	L	F	A	R	Q	P	A	K	I	H	K	P	Y	P	T	N	S	Q	I	I	X	G	D	V	L	N	H	A	A	L	K	Q	A	X	Q	G	Q	D	I	V	Y	A	N	L	T	G	E	.	.	D	L	D
Template Known Secondary structure						T	T	T	S											T	T		T	.	T								S	S	G	G	G	S		S	S			T	T								T	T										T	T		S								S	T	.	.	T
Template Predicted Secondary structure																								.																																																					.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	H	R	N	V	I	N	A	A	K	A	A	G	V	K	F	I	A	Y	T	S	L	L	H	A	D	T	S	P	L	G	L	A	D	E	H	I	E	T	E	K	M	L	A	D	S	G	I	V	Y	T	L	L	R	N	G	W	Y	S	E	N	Y	L	A	S	A	P	A	A	L	E	H	G	V	F	I	G	A	A
Query Conservation
Alig confidence																														.	.	.	.																														.	.	.	.	.	.	.
Template Conservation																														.	.	.	.																														.	.	.	.	.	.	.
Template Sequence		I	Q	A	N	S	V	I	A	A	X	K	A	C	D	V	K	R	L	I	F	V	L	S	L	G	I	G	E	.	.	.	.	P	L	K	P	F	R	R	A	A	D	A	I	E	A	S	G	L	E	Y	T	I	L	R	P	A	W	L	T	D	.	.	.	.	.	.	.	E	D	I	I	D	Y	E	L	T	S	R	N
Template Known Secondary structure														T	T														G	.	.	.	.	G	G												T	S		S													.	.	.	.	.	.	.		S									T	T
Template Predicted Secondary structure																														.	.	.	.																														.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		G	D	G	K	I	A	S	A	T	R	A	D	Y	A	A	A	A	A	R	V	I	S	E	A	G	.	H	E	G	K	V	Y	E	L	A	G	D	S	A
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		E	P	F	K	G	T	I	V	S	R	K	S	V	A	A	L	I	T	D	I	I	D	K	P	E	K	H	I	G	E	N	I	G	I	N	Q	P	G	T
Template Known Secondary structure		S			S		S																	S	T	T	T	T	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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