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Job DescriptionP39315
Confidence98.56%DateThu Jan 5 11:59:18 GMT 2012
Rank178Aligned Residues191
% Identity16%Templatec3osuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of the 3-oxoacyl-acyl carrier protein reductase,2 fabg, from staphylococcus aureus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40 .........50.........60.... ...
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Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA. . . . . . . LAAQGITVRQADYGDEAALTSALQ. . . . . . . GVE
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Template Sequence  ALVTGASRGIGRSIALQLAEE. . GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAXIKEVVSQFGSLD
Template Known Secondary structure  TT
SST..T
SS
TTS


TT
S


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   7..10.........20....... ..30.........40.........50.........60.........70.........80....
 
   68.70....... ..80.........90.........100.........110..... ..
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Query Sequence  KLLLISSSEV. . . . . . . . . . . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLA. . . . . . . . . . DE
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Template Sequence  VLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGL
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TTT

TT




TT
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   118.120.........130.........140.........150.........160.........170.........180...... ...190.....
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Query Sequence  HIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG. . HEGKVYELA
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Template Sequence  TKSAARELASRGITVNAVAPGFIVSDXTDALSDELKEQXL. . . TQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVN
Template Known Secondary structure  GGGT
SBGGG

S
S
...TT
TT
S
B
TSGGGTT

S
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   165....170.........180.........190.........200.... .....210.........220.........230.........240.
 
   196.
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Query Sequence  GD
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Template Sequence  GG
Template Known Secondary structure  TT
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   242.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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