Job Description P39315 Confidence 99.95% Date Thu Jan 5 11:59:18 GMT 2012 Rank 28 Aligned Residues 263 % Identity 15% Template c3oh8A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:nucleoside-diphosphate sugar epimerase (sula family); PDBTitle: crystal structure of the nucleoside-diphosphate sugar epimerase from2 corynebacterium glutamicum. northeast structural genomics consortium3 target cgr91 Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	L	A	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	L	Q	G	V	E	K	L	L	L	I	S	S	S	E	V	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																							.	.												.	.	.	.	.	.	.	.																.	.																		.	.	.	.
Template Conservation																							.	.												.	.	.	.	.	.	.	.																.	.
Template Sequence		V	A	I	T	G	S	R	G	L	V	G	R	A	L	T	A	Q	L	Q	T	G	.	.	G	H	E	V	I	Q	L	V	R	K	E	.	.	.	.	.	.	.	.	P	K	P	G	K	R	F	W	D	P	L	N	P	A	S	.	.	D	L	L	D	G	A	D	V	L	V	H	L	A	G	E	F	N	D	S	H	K
Template Known Secondary structure						S	T	T	S													T	.	.	T								S	S	S	.	.	.	.	.	.	.	.			T	T						T	T	S			T	.	.	T	T	T	T	T		S											G	G	G
Template Predicted Secondary structure																							.	.												.	.	.	.	.	.	.	.																.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
						78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	G	Q	R	A	P	Q	H	R	N	V	I	N	A	A	K	A	A	.	G	V	K	F	I	A	Y	T	S	L	L	H	A	D	T	S	P	L	G	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	H	I	E	T	E	K	M	L	A	D	S	G	I	V	Y	T	L	L
Query Conservation		.	.	.	.																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	I	R	E	S	R	V	L	P	T	K	F	L	A	E	L	V	A	E	S	T	Q	C	T	T	X	I	S	A	S	A	V	G	F	Y	G	H	D	R	G	D	E	I	L	T	E	E	S	E	S	G	D	D	F	L	A	E	V	C	R	D	W	E	H	A	T	A	P	A	S	D	A	G	K	R	V	A	F	I
Template Known Secondary structure								T															S	S										G	G	G	G		S									T	T	S				S	S												T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		R	N	G	W	Y	S	E	N	Y	L	A	S	A	P	.	A	A	L	E	H	G	V	F	I	G	A	A	G	D	G	K	I	A	S	A	T	R	A	D	Y	A	A	A	A	A	R	V	I	S	E	A	G	H	E	G	K	V	Y	E	L	A	G	D	S	A	W	T	L	T	Q	L	A	A	E	L	T	K	Q	S	G
Query Conservation																.
Alig confidence																.																																									.
Template Conservation																																																									.
Template Sequence		R	T	G	V	A	L	S	G	R	G	G	X	L	P	L	L	K	T	L	F	S	G	G	K	F	G	D	G	T	S	W	F	S	W	I	A	I	D	D	L	T	D	I	Y	Y	R	A	I	V	D	A	Q	I	S	G	.	P	I	N	A	V	A	P	N	P	V	S	N	A	D	X	T	K	I	L	A	T	Q	G	A
Template Known Secondary structure								B	T	T	B	S								T	T						T	T	S																							T	T				.					S		S												T	T				G
Template Predicted Secondary structure																																																									.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		215	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure				.	.	.																																																							.
Query SS confidence				.	.	.																																																							.
Query Sequence		K	Q	.	.	.	V	T	Y	Q	N	L	S	E	A	D	F	A	A	A	L	K	S	V	G	L	P	D	G	L	A	D	M	L	A	D	S	D	V	G	A	S	K	G	G	L	F	D	D	S	K	T	L	S	K	L	I	G	H	P	.	T	T	T	L	A	E	S	V	S	H	L	F
Query Conservation				.	.	.																																																							.
Alig confidence				.	.	.								.	.	.	.	.																																											.
Template Conservation														.	.	.	.	.
Template Sequence		E	E	L	A	L	A	S	Q	R	T	A	P	.	.	.	.	.	A	A	L	E	N	L	S	H	T	F	R	Y	T	D	I	G	A	A	I	A	H	E	L	G	Y	E	Q	L	A	D	F	A	Q	Q	Q	E	I	E	A	N	L	E	D	P	E	E	V	E	Q	S	I	L	S	S	I
Template Known Secondary structure		G	G	G	G	G								.	.	.	.	.						T	T				S		S	S										T					S
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.						.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions