Return to main results Retrieve Phyre Job Id

Job DescriptionP39315
Confidence98.55%DateThu Jan 5 11:59:18 GMT 2012
Rank183Aligned Residues187
% Identity12%Templatec3o38D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 smegmatis
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10 .........20.........30.........40... ......50.........60.........70...
Predicted Secondary structure 



.






.......













Query SS confidence 








.
































. . . . . . .





























Query Sequence  IAITGATGQ. LGHYVIESLMKTVPASQIVAIVRNPAKAQALAA. . . . . . . QGITVRQADYGDEAALTSALQGVEKLLLIS
Query Conservation 







 .

  

  

    
  
  
 
          .......  
  
  
  
      
           
Alig confidence 








.











..


















.......





























Template Conservation 






 



 
 
  

  ..

 


  
                         
                     
Template Sequence  VLVTAAAGTGIGSTTARRALLE. . GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL
Template Known Secondary structure  SS
SSSST..T
S
TTSSS


TT
S

Template Predicted Secondary structure 





..

































Template SS confidence 















































































   21........30.........40.. .......50.........60.........70.........80.........90........
 
   74... ..80.........90.........100.........110.........120......
Predicted Secondary structure 



...........................
















Query SS confidence 



. . . . . . . . . . . . . . . . . . . . . . . . . . .
















































Query Sequence  SSEV. . . . . . . . . . . . . . . . . . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLA
Query Conservation      ...........................                      
  

                      
Alig confidence 



...........................
















































Template Conservation                                                        
   
            
  

 
  
Template Sequence  DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVM
Template Known Secondary structure 









GGG

TTSS



GGGT


TT
Template Predicted Secondary structure 

























































Template SS confidence 















































































   99100.........110.........120.........130.........140.........150.........160.........170........
 
   127..130.........140.........150.........160.........170.........180........ .190........
Predicted Secondary structure 








































..




Query SS confidence 





























































. .









Query Sequence  DSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHE. . GKVYELAGDS
Query Conservation                                                


             ..          
Alig confidence 



























........

























..









Template Conservation       

 
    




 
 

 
 
 ........    
   




    

 
     


  
 



 
Template Sequence  ALTRCSAIEAVEFGVRINAVSPSIARHD. . . . . . . . EAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR
Template Known Secondary structure  GGGT





........
TTSS


SGGGTT

S
SS

Template Predicted Secondary structure 











........
















Template SS confidence 









































































   179180.........190.........200...... ...210.........220.........230.........240....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions