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Job DescriptionP39315
Confidence98.47%DateThu Jan 5 11:59:18 GMT 2012
Rank209Aligned Residues192
% Identity16%Templatec3nugA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-(acyl-carrier protein) reductase; PDBTitle: crystal structure of wild type tetrameric pyridoxal 4-dehydrogenase2 from mesorhizobium loti
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50.........60... ......70.
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Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA. . . QGITVRQADYGDEAALTSAL. . . . . . . QGVEKLLL
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Template Sequence  ALVTGAAQGIGKAIAARLAAD. . GATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVN
Template Known Secondary structure  TTTTST..T


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   10.........20.........30 .........40.........50.........60.........70.........80.......
 
   72..... ..80.........90.........100.........110...... ...120
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Query Sequence  ISSSEV. . . . . . . . . . . . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLAD. . . . . . . . . . EHIE
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Template Sequence  NASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRA
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   121........130.........140.........150.........160.........170.........180........ .190.......
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Query Sequence  TEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHE. . GKVYELAGD
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Template Sequence  LATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKG. . KGQPEHIADVVSFLASDDARWITGQTLNVDAG
Template Known Secondary structure  GGGT
SB

TSGGGGGSSS
S..
B
SGGGTT

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   168.170.........180.........190.........200.........210.. .......220.........230.........240....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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