Job Description P39315 Confidence 98.63% Date Thu Jan 5 11:59:18 GMT 2012 Rank 152 Aligned Residues 194 % Identity 16% Template c3lf2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short chain oxidoreductase q9hya2; PDBTitle: nadph bound structure of the short chain oxidoreductase q9hya2 from2 pseudomonas aeruginosa pao1 containing an atypical catalytic center Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	L	A	.	.	.	.	.	.	.	.	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	.	.	.	.	.	.	.	L	T	S	A	L	Q	G	V
Query Conservation																																											.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Alig confidence																							.	.																			.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		A	V	V	T	G	G	S	S	G	I	G	L	A	T	V	E	L	L	L	E	A	.	.	G	A	A	V	A	F	C	A	R	D	G	E	R	L	R	A	A	E	S	A	L	R	Q	R	F	P	G	A	R	L	F	A	S	V	C	D	V	L	D	A	L	Q	V	R	A	F	A	E	A	C	E	R	T	L	G	C	A
Template Known Secondary structure						S		S	S													T	.	.	T								S																S	T	T										T	T																		S
Template Predicted Secondary structure																							.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.																					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query Sequence		E	K	L	L	L	I	S	S	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	R	A	P	Q	H	R	N	V	I	N	A	A	K	A	A	G	V	K	F	I	A	Y	T	S	L	L	H	A	D	T	S	P	L	G	L	A	D	E	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	L	V	N	N	A	G	Q	G	R	V	S	T	F	A	E	T	T	D	E	A	W	S	E	E	L	Q	L	K	F	F	S	V	I	H	P	V	R	A	F	L	P	Q	L	E	S	R	A	D	A	A	I	V	C	V	N	S	L	L	A	S	Q	P	E	P	H	M	V	A	T	S	A	A	R	A	G	V	K	N
Template Known Secondary structure		S												B		S	T	T																													T	T	S	S	S									G	G	G	T	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
			118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.										.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.																																																			.	.	.	.	.	.	.	.	.																				.
Query SS confidence		.																																																			.	.	.	.	.	.	.	.	.																				.
Query Sequence		.	H	I	E	T	E	K	M	L	A	D	S	G	I	V	Y	T	L	L	R	N	G	W	Y	S	E	N	Y	L	A	S	A	P	A	A	L	E	H	G	V	F	I	G	A	A	G	D	G	K	I	A	.	.	.	.	.	.	.	.	.	S	A	T	R	A	D	Y	A	A	A	A	A	R	V	I	S	E	A	G	.
Query Conservation		.																																																			.	.	.	.	.	.	.	.	.																				.
Alig confidence		.																																																			.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		L	V	R	S	M	A	F	E	F	A	P	K	G	V	R	V	N	G	I	L	I	G	L	V	E	S	G	Q	W	R	R	R	F	E	A	R	E	E	R	E	L	D	W	A	Q	W	T	A	Q	L	A	R	N	K	Q	I	P	L	G	R	L	G	K	P	I	E	A	A	R	A	I	L	F	L	A	S	P	L	S	A
Template Known Secondary structure											G	G	G	T										S	B		S									T		S		T	T														T	T		T	T	S	S		B														S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
			187	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	H	E	G	K	V	Y	E	L	A	G	D
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		Y	T	T	G	S	H	I	D	V	S	G	G
Template Known Secondary structure		T			S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions